Gene detail information of Glyur000002s00000251 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G54290.1 | 5.00E-65 | |
| NR | XP_004497145.1 | 1.52E-133 | PREDICTED: uncharacterized protein LOC101515224 [Cicer arietinum] |
| trEMBL | tr|V7BEF8|V7BEF8_PHAVU | 2.00E-130 | Uncharacterized protein {ECO:0000313|EMBL:ESW14856.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00002 | 258340 | 260813 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000002s00000251.1 | PF01814.18 | Hemerythrin | 114 | 224 | 3.50E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.352 |
| SRR1783600 | control | 8.323 |
| SRR1783602 | moderate drought stress | 8.683 |
| SRR1811619 | moderate drought stress | 8.640 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.262 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.982 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.335 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.995 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.217 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.221 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.209 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.389 |
| SRR2868004 | Drought Stress (root) | 28.591 |
| SRR2967015 | Control (root) | 32.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.360 |
| SRR9715740 | Leaf | 13.799 |
| SRR9715741 | Leaf | 11.381 |
| SRR9715739 | Root | 13.213 |
| SRR9715742 | Root | 9.374 |
| SRR9715743 | Root | 11.783 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.298 |
| SRR8749028 | MeJA induced 9h | 10.581 |
| SRR8749029 | MeJA induced 9h | 8.647 |
| SRR8749030 | Uninduced | 6.985 |
| SRR8749031 | Uninduced | 8.152 |
| SRR8749032 | Uninduced | 13.136 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.359 |
| SRR8400027 | Control - Root | 15.051 |