Gene detail information of Glyur000002s00000227 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75010.1 | 1.00E-167 | GTP binding |
| NR | XP_004497166.1 | 0 | PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3-like isoform X2 [Cicer arietinum] |
| COG | NP_809660.1 | 6.00E-19 | phosphatidylinositol-4-phosphate 5-kinase [Bacteroides thetaiotaomicron VPI-5482] |
| Swissprot | tr|Q6F6B5|ARC3_ARATH | 0 | Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 (Precursor) |
| trEMBL | tr|K7LLW6|K7LLW6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G42691.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00002 | 125483 | 134828 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000002s00000227.1 | PF02493.15 | MORN | 649 | 665 | 7.4 |
| Glyur000002s00000227.1 | PF02493.15 | MORN | 667 | 689 | 2.40E-05 |
| Glyur000002s00000227.1 | PF02493.15 | MORN | 690 | 712 | 9.30E-05 |
| Glyur000002s00000227.1 | PF02493.15 | MORN | 717 | 734 | 22 |
| Glyur000002s00000227.1 | PF02493.15 | MORN | 736 | 748 | 2.1 |
| Glyur000002s00000227.2 | PF02493.15 | MORN | 625 | 641 | 7.1 |
| Glyur000002s00000227.2 | PF02493.15 | MORN | 643 | 665 | 2.30E-05 |
| Glyur000002s00000227.2 | PF02493.15 | MORN | 666 | 688 | 8.90E-05 |
| Glyur000002s00000227.2 | PF02493.15 | MORN | 693 | 710 | 21 |
| Glyur000002s00000227.2 | PF02493.15 | MORN | 712 | 724 | 2 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.406 |
| SRR1783600 | control | 6.463 |
| SRR1783602 | moderate drought stress | 6.867 |
| SRR1811619 | moderate drought stress | 6.698 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.812 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.476 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.640 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.567 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.705 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.773 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.360 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.365 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.104 |
| SRR2868004 | Drought Stress (root) | 6.204 |
| SRR2967015 | Control (root) | 6.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.128 |
| SRR9715740 | Leaf | 22.748 |
| SRR9715741 | Leaf | 17.509 |
| SRR9715739 | Root | 1.524 |
| SRR9715742 | Root | 5.560 |
| SRR9715743 | Root | 4.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.051 |
| SRR8749028 | MeJA induced 9h | 3.207 |
| SRR8749029 | MeJA induced 9h | 2.234 |
| SRR8749030 | Uninduced | 1.337 |
| SRR8749031 | Uninduced | 0.517 |
| SRR8749032 | Uninduced | 0.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.914 |
| SRR8400027 | Control - Root | 12.874 |