Gene detail information of Glyur000002s00000222 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24175.1 | 3.00E-40 | |
| NR | AFK42020.1 | 8.49E-122 | unknown [Medicago truncatula] |
| COG | YP_004418693.1 | 3.00E-06 | hypothetical protein PT7_3529 [Pusillimonas sp. T7-7] |
| trEMBL | tr|I3SP28|I3SP28_MEDTR | 3.00E-122 | Uncharacterized protein {ECO:0000313|EMBL:AFK42020.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00002 | 98714 | 101026 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000002s00000222.1 | PF04751.9 | DUF615 | 83 | 282 | 1.40E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.839 |
| SRR1783600 | control | 7.129 |
| SRR1783602 | moderate drought stress | 4.349 |
| SRR1811619 | moderate drought stress | 4.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.642 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.162 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.494 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.317 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.734 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.188 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.041 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.623 |
| SRR2868004 | Drought Stress (root) | 2.589 |
| SRR2967015 | Control (root) | 3.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.834 |
| SRR9715740 | Leaf | 2.911 |
| SRR9715741 | Leaf | 2.741 |
| SRR9715739 | Root | 2.444 |
| SRR9715742 | Root | 3.075 |
| SRR9715743 | Root | 3.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.783 |
| SRR8749028 | MeJA induced 9h | 2.188 |
| SRR8749029 | MeJA induced 9h | 2.841 |
| SRR8749030 | Uninduced | 0.679 |
| SRR8749031 | Uninduced | 0.253 |
| SRR8749032 | Uninduced | 0.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.325 |
| SRR8400027 | Control - Root | 6.401 |