Gene detail information of Glyur000002s00000212


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G68010.10hydroxypyruvate reductase
NRKEH44351.10D-glycerate dehydrogenase/hydroxypyruvate reductase [Medicago truncatula]
COGYP_430795.18.00E-72D-isomer specific 2-hydroxyacid dehydrogenase [Moorella thermoacetica ATCC 39073]
Swissprottr|Q9C9W5|HPR1_ARATH0Glycerate dehydrogenase HPR, peroxisomal
trEMBLtr|A0A072VRS6|A0A072VRS6_MEDTR0D-glycerate dehydrogenase/hydroxypyruvate reductase {ECO:0000313|EMBL:KEH44351.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold000022261127004-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016616  oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

GO:0051287  NAD binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000002s00000212.1PF00389.252-Hacid_dh413143.10E-17
Glyur000002s00000212.1PF02826.142-Hacid_dh_C1303172.60E-44
Glyur000002s00000212.2PF00389.252-Hacid_dh401395.60E-17
Glyur000002s00000212.2PF02826.142-Hacid_dh_C1302002.50E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.053
SRR1783600control0.051
SRR1783602moderate drought stress0.072
SRR1811619moderate drought stress0.070

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.050
DRR006520Root Summer glycyrrhizin high producing strain0.047
DRR006521Root Winter glycyrrhizin high producing strain0.103
DRR006522Root Winter glycyrrhizin high producing strain0.100
DRR006523Root Summer glycyrrhizin low producing strain0.255
DRR006524Root Summer glycyrrhizin low producing strain0.205
DRR006525Leaf Summer glycyrrhizin high producing strain292.429
DRR006526Leaf Summer glycyrrhizin high producing strain291.516

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)5.155
SRR2868004Drought Stress (root)9.405
SRR2967015Control (root)3.710

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf364.609
SRR9715740Leaf376.388
SRR9715741Leaf318.125
SRR9715739Root0.023
SRR9715742Root0.339
SRR9715743Root0.422

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.175
SRR8749028MeJA induced 9h5.158
SRR8749029MeJA induced 9h2.897
SRR8749030Uninduced1.384
SRR8749031Uninduced0.284
SRR8749032Uninduced1.367

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root0.925
SRR8400027Control - Root0.558

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved