Gene detail information of Glyur000002s00000210 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G16900.1 | 2.00E-33 | Arabidopsis phospholipase-like protein (PEARLI 4) family |
| NR | KEH44366.1 | 0 | plant phospholipase-like protein [Medicago truncatula] |
| trEMBL | tr|A0A072VRU0|A0A072VRU0_MEDTR | 0 | Plant phospholipase-like protein {ECO:0000313|EMBL:KEH44366.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00002 | 12574 | 16436 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000002s00000210.1 | PF05278.7 | PEARLI-4 | 233 | 428 | 5.30E-59 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.687 |
| SRR1783600 | control | 16.752 |
| SRR1783602 | moderate drought stress | 25.659 |
| SRR1811619 | moderate drought stress | 25.895 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.469 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.455 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.859 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.656 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.034 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.070 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.589 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 74.190 |
| SRR2868004 | Drought Stress (root) | 97.201 |
| SRR2967015 | Control (root) | 66.772 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 56.066 |
| SRR9715740 | Leaf | 37.111 |
| SRR9715741 | Leaf | 101.098 |
| SRR9715739 | Root | 13.159 |
| SRR9715742 | Root | 15.758 |
| SRR9715743 | Root | 14.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 112.945 |
| SRR8749028 | MeJA induced 9h | 189.364 |
| SRR8749029 | MeJA induced 9h | 289.362 |
| SRR8749030 | Uninduced | 257.615 |
| SRR8749031 | Uninduced | 522.489 |
| SRR8749032 | Uninduced | 490.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 56.208 |
| SRR8400027 | Control - Root | 36.045 |