Gene detail

Gene detail information of Glyur000001s00000206.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G02590.2	3.00E-52	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
NR	XP_004496017.1	1.18E-157	PREDICTED: transcription factor UNE12-like [Cicer arietinum]
Swissprot	tr\|O22768\|UNE12_ARATH	7.00E-76	Transcription factor UNE12
trEMBL	tr\|A0A072VNM4\|A0A072VNM4_MEDTR	2.00E-156	Transcription factor UNE12-like protein {ECO:0000313\|EMBL:KEH43018.1}

Sequence

Transcript Sequence

>Glyur000001s00000206.1
AAGAAAATGACGATATATCCTTACATAAATAGTAAAATAAAAATAATATTTTTCCATATTATCATTATTATTTCAACACATTTTGAAGTTTTGAAGAATTCATATTCATTTTTTGGAGGAAAAAAAGGGAGAAGAAAAGTGAGCGCGTGCGCGTGCACGTAACAAAAACTCAAGCACGATATGAACGTTTGCCTGCCCAACTTTCTTTTTGCCGTTTTCTACTCTATGTTCTTCCTTCCTTCCTCCGTTTTTGTGATCTGTGAACCGTCTCGTCCCTCTCACATTGTTTTTAGTCTTTTTAATTAAAGCCGTAGCGCACTCCGCATTCTCTTCTCTCTCTTTGTAGAGACAGAAACTCAGAAGAAGCAAAAGCTGAAAAGCTTAACTGTACTGCGAAATATAAAGACCGCAACAACTCCCTAATCCAATCCAATCCCACCACACACACACACACACACACACACACTCACTCTCTCTCTTCCTTGTTTTCTTCTTTTATTCCTCCTCCATTCTCACTCCCCTCTCAGTTGTTGTTGTTTATTGATTCCATAATTCCAGCAACAAAACAAAAACATTATCGGGAAGCGGAACCCCCAAAATTCCATTCCCNGTCATCGGGTTTTGAATCAGCCAACCGCTTTCACACACCATAANAACAACCCTCCTTGTTTTCCGCTCTTCGTGCTTTTCCAAATTAACTTGTCCAGTTTGTTTTCACCTTGCAAGACAATAAGAGAACAAATAATGCGGCAATATTAAATTAAAAAGCAGGTTGCTCTCTGCAAACTCGCTCGTTTAAGCTGAAAGCTTCTGAGAGAAGAGAAGAGAAGAAGGAAAGAAAAAAAAAAGAAAGAAAGAAAAAGGAATAGAGAGATGGCGGGTAATTGTTCGGAGGGATTGAGTGACGATTTCTTCGAGCAGATCTTGGCAGTGCCTGAGACCGGTGTGGGAGGATATGGCGGAGGCAGGGTGGGCGATGTGGGAGTGTTGCAGCTGGGCCCCACTCCTCTGCCCTTGCCCTTGGGGTTGAATTTGGAGCAAAATGGCTTTCTCAGGCACCACCACCACCAAGATGCACCACCACGCCAATTCGTTGACAACAACGTTGTTGATGTTGAGGGCAGCAACGTTAGAAATAATAACCACCTCCATCACCAACACCAACACCTCCGTCTCCATGACATGAATAACAACAACACCTCATCATCCCCCTCTTCTACTGCGGTAATCACTGATAGGGATTCGATGCACATGAGGGGTTTGTTCACACCGTTCGGACAATTGCATTCTCCTACTCATCCTCACTCTCTACGCCCCATGCTCCCATCTCCATCTCCGCCTCAACCCCAACTCCACCTCCACCNTCAACACCACCAACAGCCCTTTCAGAGCCAGCCACCAACTCCAGCATCTGTTAATGGTGCTATGCCTCAACCACCTGGCATTCGCCCTCGAGTGAGAGCAAGAAGAGGCCAAGCCACAGACCCCCACAGTATTGCTGAGCGGTTACGTCGTGAAAGAATCGCTGAAAGAATGAAGGCACTACAGGAGTTAGTTCCCAGCATCAATAAGACAGACAAAGCAGCGATGCTTGATGAAATTGTGGATTATGTGAAGTTCCTAAGGCTCCAGGTCAAGGTCTTGAGCATGAGTAGACTGGGTGGAGCTGGCGCAGTTGCTCAGCTTGTGGCTGATGTCCCCCTTTCTGCAGTGGAGGGGGAGGACATAGAAGGTGGAGCCAACCAGCAAGCCTGGACCAAGTGGTCCAACGATGGCACAGAACAACAAGTGGCTAAACTTATGGAAGAAGATGTTGGAGCAGCTATGCAATTTCTTCAGTCCAAGGCGCTTTGTATCATGCCCATATCCCTAGCCTCAGCAATCTTTCGTATGCCCCAATCAGAATCAACAACCATCAAGCCTGAATCAAACGGCCACTCATAGTTCTTGAACAAAAACATCTCGTGACAGACATAGCATAAACTTGTCTAGCTGGCTAAAATCTCTAGACCCCGAATTTCCTCCCATTTTCCCTCCTTTATGACATGGGTATTAATTAATTCTACTTTTTAGTATACTTTTCTGATTGGATGGATAAGTATTTAGTCAGTAGTCAGTGCAGCTGTTGATTTTTGCTTTCCTAGTTTTGTCAAACAAGGAGTAATTGTCATTGCTAATAAGTTAACCCAAGGAGCCCAACATGTCCAAGTCATGGTGAAAGATATCAATTAATATTTTCAATGGCCCTATTGATGTTTTTTCTGGTAGGGTCGGTGGTATTTGTAGTGGAGGCTCCTTTTCTTTGTTTTTATTTTGAGTCAGTGGATAGTGGGACCATTTAAAAGGAAGAGGTGCGGGGTATGAATGATGTATTTGGAGAAAATTTTAATGCAAGTTGAATTAAAATATGGTTATTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00001	1092405	1099203	+

Gene family

Gene family	subfamily
Transcription Factors Family	bHLH

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0046983 protein dimerization activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000001s00000206.1	PF00010.21	HLH	206	250	4.60E-08

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	116.879
SRR1783600	control	116.428
SRR1783602	moderate drought stress	155.557
SRR1811619	moderate drought stress	155.776

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	96.080
DRR006520	Root Summer glycyrrhizin high producing strain	95.343
DRR006521	Root Winter glycyrrhizin high producing strain	71.312
DRR006522	Root Winter glycyrrhizin high producing strain	68.837
DRR006523	Root Summer glycyrrhizin low producing strain	103.667
DRR006524	Root Summer glycyrrhizin low producing strain	103.233
DRR006525	Leaf Summer glycyrrhizin high producing strain	19.991
DRR006526	Leaf Summer glycyrrhizin high producing strain	20.590

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	73.742
SRR2868004	Drought Stress (root)	103.537
SRR2967015	Control (root)	114.585

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	27.435
SRR9715740	Leaf	26.549
SRR9715741	Leaf	36.780
SRR9715739	Root	47.197
SRR9715742	Root	90.081
SRR9715743	Root	72.982

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	110.310
SRR8749028	MeJA induced 9h	80.838
SRR8749029	MeJA induced 9h	124.995
SRR8749030	Uninduced	28.662
SRR8749031	Uninduced	23.485
SRR8749032	Uninduced	59.080

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	77.435
SRR8400027	Control - Root	79.832