Gene detail

Gene detail information of Glyur000001s00000202

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G28770.2	1.00E-44	bZIP transcription factor family protein
NR	XP_004495799.1	1.60E-126	PREDICTED: light-inducible protein CPRF2-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q99090\|CPRF2_PETCR	1.00E-80	Light-inducible protein CPRF2
trEMBL	tr\|I1NIQ1\|I1NIQ1_SOYBN	2.00E-125	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA20G36750.1}

Sequence

Transcript Sequence

>Glyur000001s00000202.1
ATGGATAGGGTGTTCTCCTCAGTCGATGAAATCTCCGACCTTTTTTTTTCGCCGCCGATCCATGTCGCCGGCGTTGACGACTCCTCCAAGATGAGCCGCAGCGCCTCCGAGTGGGCCTTCCAGCGCTTCCTTCAGGAAGCCTCAGCTTTTTTTTTCGCCACCTCTCCCCCTTCTTCTTCCTCCGCCGCGGACGTTGTATTCGGCGAGATCGGCGACCGGCCAAAACCAAGCATCGACGGCGCGCCACTTCCGACGAACGGCGCCGTTTTGCCCGATGGGCCTCCTCCGGCGCCCGTCGATTCCGAGGAATACCGGGCTTTCCTCAAGAGCAAGCTCAATCTCGCGTGTGCTGCTGTTTTTTTTTCTAGGTTGCATTTAATTTATCCAGCCACTTTTCCTGACAGTGGACCACAACTGTCTAATCCTAGTCAAGTTGGATCCCAGCCCACTTTTAAAGGATCTGCTCCTTCCGGAAATGATCCATCTAGATTATTTTTTTTTGATACCAAAGTACCAGTTGGGGTTCCTTCCATACCTGCTGTGCAGAAGAAACCTGCTGTTACAACTAGGCAATCAACAAGTGGATCATCAAGAGAACTTTTTTTTTATGAAGAAGCTGAGGGAGAGACAGATATGAATGACAACGCAGACTTTTTTTTTGTAAAACGAGTAAGGAGGATGCTTTCCAATAGGGAGTCTTTTTTTTTCTCAAGAAGAAGAAAGCAGGCTCATTTAACTGAGCTGGAAACACTTTTTTTTTTATTTTATTTTAGATTTTGGCTTTCCTCCCATAGAAATTTTGATGTTTCTCAATTAAGAGGTGAAAATTCTTCCTTGTTAAAGCGCCTTACTGATGTAAGCCAGAAATACAATGACTCTGCTGTGGACAACAGAGTGTTAAAAGCTGATGTTGAAACGTTAAGAGCAAAGGTGAAGATGGCTGAAGAGACTGTCTTTTTTTTTACTGGGTTGAACCCAATGTTTCATGCCATGCCTGATATATCATCTTTTTTTTTGCCATTTGATGGAAGCCCATCAGACAATTCAGCTGATGCAGCTGTTTTTTTTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00001	1081205	1084379	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000001s00000202.1	PF12498.3	bZIP_C	306	353	5.10E-12

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	10.626
SRR1783600	control	12.346
SRR1783602	moderate drought stress	12.893
SRR1811619	moderate drought stress	12.560

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.368
DRR006520	Root Summer glycyrrhizin high producing strain	4.444
DRR006521	Root Winter glycyrrhizin high producing strain	4.268
DRR006522	Root Winter glycyrrhizin high producing strain	4.601
DRR006523	Root Summer glycyrrhizin low producing strain	6.357
DRR006524	Root Summer glycyrrhizin low producing strain	4.868
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.874
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.143

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.794
SRR2868004	Drought Stress (root)	3.731
SRR2967015	Control (root)	4.367

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.101
SRR9715740	Leaf	2.953
SRR9715741	Leaf	2.676
SRR9715739	Root	1.402
SRR9715742	Root	4.177
SRR9715743	Root	3.331

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.480
SRR8749028	MeJA induced 9h	1.375
SRR8749029	MeJA induced 9h	1.796
SRR8749030	Uninduced	1.418
SRR8749031	Uninduced	1.664
SRR8749032	Uninduced	2.007

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.809
SRR8400027	Control - Root	4.057