Gene detail information of Glyur000001s00000199 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14746.1 | 1.00E-17 | |
| NR | NP_001238033.1 | 8.34E-100 | uncharacterized protein LOC100500690 precursor [Glycine max] |
| trEMBL | tr|C6T2H8|C6T2H8_SOYBN | 3.00E-100 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G30340.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00001 | 1050736 | 1052474 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 74.383 |
| SRR1783600 | control | 75.988 |
| SRR1783602 | moderate drought stress | 106.010 |
| SRR1811619 | moderate drought stress | 105.967 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.157 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.231 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.189 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 177.824 |
| SRR2868004 | Drought Stress (root) | 470.571 |
| SRR2967015 | Control (root) | 118.731 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.271 |
| SRR9715740 | Leaf | 3.557 |
| SRR9715741 | Leaf | 8.679 |
| SRR9715739 | Root | 106.961 |
| SRR9715742 | Root | 51.230 |
| SRR9715743 | Root | 59.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.013 |
| SRR8749028 | MeJA induced 9h | 1.747 |
| SRR8749029 | MeJA induced 9h | 9.991 |
| SRR8749030 | Uninduced | 7.876 |
| SRR8749031 | Uninduced | 14.459 |
| SRR8749032 | Uninduced | 20.353 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 237.033 |
| SRR8400027 | Control - Root | 173.087 |