Gene detail information of Glyur000001s00000193 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G56750.1 | 2.00E-125 | N-MYC downregulated-like 1 |
| NR | AFK42089.1 | 0 | unknown [Lotus japonicus] |
| Swissprot | tr|O23969|SF21_HELAN | 1.00E-142 | Pollen-specific protein SF21 |
| trEMBL | tr|I3SP97|I3SP97_LOTJA | 0 | Uncharacterized protein {ECO:0000313|EMBL:AFK42089.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00001 | 1013273 | 1017789 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000001s00000193.1 | PF03096.9 | Ndr | 28 | 310 | 1.00E-98 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.130 |
| SRR1783600 | control | 13.222 |
| SRR1783602 | moderate drought stress | 7.341 |
| SRR1811619 | moderate drought stress | 7.381 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.565 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.281 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.919 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.644 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.865 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.783 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.802 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.668 |
| SRR2868004 | Drought Stress (root) | 13.028 |
| SRR2967015 | Control (root) | 14.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.654 |
| SRR9715740 | Leaf | 5.060 |
| SRR9715741 | Leaf | 4.383 |
| SRR9715739 | Root | 6.333 |
| SRR9715742 | Root | 5.339 |
| SRR9715743 | Root | 5.795 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.330 |
| SRR8749028 | MeJA induced 9h | 13.626 |
| SRR8749029 | MeJA induced 9h | 27.491 |
| SRR8749030 | Uninduced | 2.890 |
| SRR8749031 | Uninduced | 7.623 |
| SRR8749032 | Uninduced | 17.046 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.593 |
| SRR8400027 | Control - Root | 15.671 |