Gene detail information of Glyur000001s00000189 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G04890.1 | 4.00E-53 | Uncharacterized conserved protein (DUF2358) |
| NR | XP_003591013.1 | 9.87E-123 | hypothetical protein MTR_1g081280 [Medicago truncatula] |
| trEMBL | tr|G7I6W9|G7I6W9_MEDTR | 4.00E-123 | DUF2358 family protein {ECO:0000313|EMBL:AES61264.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00001 | 987953 | 990843 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000001s00000189.1 | PF10184.4 | DUF2358 | 98 | 210 | 8.10E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.368 |
| SRR1783600 | control | 2.401 |
| SRR1783602 | moderate drought stress | 3.452 |
| SRR1811619 | moderate drought stress | 3.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.287 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.210 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.149 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.333 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.496 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.220 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.158 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.925 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.970 |
| SRR2868004 | Drought Stress (root) | 8.191 |
| SRR2967015 | Control (root) | 5.453 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.432 |
| SRR9715740 | Leaf | 23.156 |
| SRR9715741 | Leaf | 17.181 |
| SRR9715739 | Root | 0.772 |
| SRR9715742 | Root | 2.867 |
| SRR9715743 | Root | 2.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.948 |
| SRR8749028 | MeJA induced 9h | 6.082 |
| SRR8749029 | MeJA induced 9h | 4.129 |
| SRR8749030 | Uninduced | 2.858 |
| SRR8749031 | Uninduced | 1.445 |
| SRR8749032 | Uninduced | 1.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.328 |
| SRR8400027 | Control - Root | 7.576 |