Gene detail information of Glyur000001s00000185


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G28060.19.00E-62Ribosomal protein S24e family protein
NRNP_001240176.15.21E-92uncharacterized protein LOC100802918 [Glycine max]
COGYP_184109.17.00E-1330S ribosomal protein S24e [Thermococcus kodakarensis KOD1]
Swissprottr|Q8LC83|RS242_ARATH4.00E-8340S ribosomal protein S24-2
trEMBLtr|C6TAW2|C6TAW2_SOYBN2.00E-9240S ribosomal protein S24 {ECO:0000256|RuleBase:RU004383}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00001963511965850-


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0000166  nucleotide binding

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000001s00000185.1PF01282.14Ribosomal_S24e241067.70E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control98.860
SRR1783600control99.809
SRR1783602moderate drought stress88.449
SRR1811619moderate drought stress87.569

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain373.091
DRR006520Root Summer glycyrrhizin high producing strain370.200
DRR006521Root Winter glycyrrhizin high producing strain168.310
DRR006522Root Winter glycyrrhizin high producing strain163.167
DRR006523Root Summer glycyrrhizin low producing strain276.054
DRR006524Root Summer glycyrrhizin low producing strain274.801
DRR006525Leaf Summer glycyrrhizin high producing strain62.626
DRR006526Leaf Summer glycyrrhizin high producing strain62.688

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)415.330
SRR2868004Drought Stress (root)266.277
SRR2967015Control (root)257.084

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf144.847
SRR9715740Leaf140.490
SRR9715741Leaf127.401
SRR9715739Root118.752
SRR9715742Root221.383
SRR9715743Root197.315

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h394.876
SRR8749028MeJA induced 9h102.383
SRR8749029MeJA induced 9h224.864
SRR8749030Uninduced36.006
SRR8749031Uninduced28.313
SRR8749032Uninduced46.101

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root308.439
SRR8400027Control - Root292.016

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved