Gene detail information of Glyur000001s00000171 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40020.2 | 3.00E-07 | Nucleolar histone methyltransferase-related protein |
| NR | XP_004495775.1 | 4.07E-96 | PREDICTED: uncharacterized protein LOC101489937 isoform X2 [Cicer arietinum] |
| trEMBL | tr|K7N558|K7N558_SOYBN | 1.00E-75 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G37322.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00001 | 880236 | 884444 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000001s00000171.1 | PF10440.4 | WIYLD | 8 | 70 | 1.60E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.748 |
| SRR1783600 | control | 6.017 |
| SRR1783602 | moderate drought stress | 4.905 |
| SRR1811619 | moderate drought stress | 4.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.952 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.014 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.328 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.474 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.635 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.681 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.505 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.442 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.015 |
| SRR2868004 | Drought Stress (root) | 3.953 |
| SRR2967015 | Control (root) | 3.884 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.116 |
| SRR9715740 | Leaf | 3.369 |
| SRR9715741 | Leaf | 4.242 |
| SRR9715739 | Root | 1.662 |
| SRR9715742 | Root | 3.387 |
| SRR9715743 | Root | 3.324 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.383 |
| SRR8749028 | MeJA induced 9h | 12.425 |
| SRR8749029 | MeJA induced 9h | 18.320 |
| SRR8749030 | Uninduced | 10.464 |
| SRR8749031 | Uninduced | 8.038 |
| SRR8749032 | Uninduced | 15.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.825 |
| SRR8400027 | Control - Root | 4.145 |