Gene detail information of Glyur000001s00000153 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G39340.1 | 8.00E-24 | histidine-containing phosphotransmitter 3 |
| NR | NP_001238402.1 | 5.84E-49 | uncharacterized protein LOC100306665 [Glycine max] |
| Swissprot | tr|Q9SAZ5|AHP3_ARATH | 4.00E-29 | Histidine-containing phosphotransfer protein 3 |
| trEMBL | tr|C6T0D1|C6T0D1_SOYBN | 2.00E-49 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G29890.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00001 | 762614 | 765682 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000001s00000153.1 | PF01627.18 | Hpt | 45 | 87 | 4.00E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.124 |
| SRR1783600 | control | 2.002 |
| SRR1783602 | moderate drought stress | 4.628 |
| SRR1811619 | moderate drought stress | 4.806 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.250 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.839 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 147.316 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 135.323 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.263 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.330 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.785 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.761 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.602 |
| SRR2868004 | Drought Stress (root) | 7.605 |
| SRR2967015 | Control (root) | 19.971 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.312 |
| SRR9715740 | Leaf | 5.205 |
| SRR9715741 | Leaf | 1.983 |
| SRR9715739 | Root | 1.440 |
| SRR9715742 | Root | 3.088 |
| SRR9715743 | Root | 1.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 60.634 |
| SRR8749028 | MeJA induced 9h | 31.180 |
| SRR8749029 | MeJA induced 9h | 20.174 |
| SRR8749030 | Uninduced | 0.305 |
| SRR8749031 | Uninduced | 0.187 |
| SRR8749032 | Uninduced | 0.479 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.568 |
| SRR8400027 | Control - Root | 6.750 |