Gene detail information of Glyur000001s00000139 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G27390.1 | 1.00E-73 | Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein |
| NR | XP_003536094.1 | 4.85E-126 | PREDICTED: uncharacterized protein LOC100812488 [Glycine max] |
| trEMBL | tr|K7LJM8|K7LJM8_SOYBN | 8.00E-126 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G29795.2} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00001 | 721432 | 724085 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.253 |
| SRR1783600 | control | 1.490 |
| SRR1783602 | moderate drought stress | 0.950 |
| SRR1811619 | moderate drought stress | 0.822 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.507 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.446 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.137 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.038 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.510 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.196 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.653 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 25.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.634 |
| SRR2868004 | Drought Stress (root) | 2.487 |
| SRR2967015 | Control (root) | 1.928 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.261 |
| SRR9715740 | Leaf | 30.573 |
| SRR9715741 | Leaf | 19.267 |
| SRR9715739 | Root | 0.124 |
| SRR9715742 | Root | 0.461 |
| SRR9715743 | Root | 0.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.274 |
| SRR8749028 | MeJA induced 9h | 1.234 |
| SRR8749029 | MeJA induced 9h | 0.956 |
| SRR8749030 | Uninduced | 0.437 |
| SRR8749031 | Uninduced | 0.285 |
| SRR8749032 | Uninduced | 0.191 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.687 |
| SRR8400027 | Control - Root | 2.518 |