Gene detail information of Glyur000001s00000125 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G19090.3 | 4.00E-30 | Heavy metal transport/detoxification superfamily protein |
| NR | XP_003520816.1 | 2.76E-114 | PREDICTED: uncharacterized protein LOC100783289 isoform X1 [Glycine max] |
| Swissprot | tr|Q9SZN7|HIP26_ARATH | 6.00E-10 | Heavy metal-associated isoprenylated plant protein 26 (Precursor) |
| trEMBL | tr|K7KGQ2|K7KGQ2_SOYBN | 1.00E-114 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G39950.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00001 | 628809 | 631758 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000001s00000125.1 | PF00403.21 | HMA | 16 | 71 | 1.20E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 106.643 |
| SRR1783600 | control | 106.236 |
| SRR1783602 | moderate drought stress | 127.715 |
| SRR1811619 | moderate drought stress | 126.788 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 47.992 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 47.789 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.257 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.087 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 113.134 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 113.601 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.292 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.797 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 93.630 |
| SRR2868004 | Drought Stress (root) | 105.240 |
| SRR2967015 | Control (root) | 121.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.363 |
| SRR9715740 | Leaf | 4.657 |
| SRR9715741 | Leaf | 10.756 |
| SRR9715739 | Root | 5.219 |
| SRR9715742 | Root | 42.571 |
| SRR9715743 | Root | 38.918 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 32.603 |
| SRR8749028 | MeJA induced 9h | 18.177 |
| SRR8749029 | MeJA induced 9h | 13.257 |
| SRR8749030 | Uninduced | 8.344 |
| SRR8749031 | Uninduced | 0.370 |
| SRR8749032 | Uninduced | 1.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 72.171 |
| SRR8400027 | Control - Root | 73.326 |