Gene detail information of Glyur000001s00000122 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G20870.1 | 9.00E-58 | HSP20-like chaperones superfamily protein |
| NR | XP_004495740.1 | 0 | PREDICTED: uncharacterized protein LOC101506728 [Cicer arietinum] |
| trEMBL | tr|G7I815|G7I815_MEDTR | 1.00E-177 | Alpha-crystallin domain of heat shock protein {ECO:0000313|EMBL:AES61336.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00001 | 613153 | 614915 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.346 |
| SRR1783600 | control | 0.594 |
| SRR1783602 | moderate drought stress | 0.328 |
| SRR1811619 | moderate drought stress | 0.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.177 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.100 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.090 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.090 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.640 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.713 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.531 |
| SRR2868004 | Drought Stress (root) | 1.098 |
| SRR2967015 | Control (root) | 0.891 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.565 |
| SRR9715740 | Leaf | 1.622 |
| SRR9715741 | Leaf | 0.839 |
| SRR9715739 | Root | 0.481 |
| SRR9715742 | Root | 0.239 |
| SRR9715743 | Root | 0.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.193 |
| SRR8749028 | MeJA induced 9h | 8.824 |
| SRR8749029 | MeJA induced 9h | 10.512 |
| SRR8749030 | Uninduced | 0.789 |
| SRR8749031 | Uninduced | 1.972 |
| SRR8749032 | Uninduced | 1.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.129 |
| SRR8400027 | Control - Root | 0.760 |