Gene detail information of Glyur000001s00000120 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN16137.1 | 3.21E-53 | hypothetical protein glysoja_012113 [Glycine soja] |
| trEMBL | tr|K7N579|K7N579_SOYBN | 6.00E-61 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G37635.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00001 | 610492 | 611663 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.350 |
| SRR1783600 | control | 1.295 |
| SRR1783602 | moderate drought stress | 0.821 |
| SRR1811619 | moderate drought stress | 0.772 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.431 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.595 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.561 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.485 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.140 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.174 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.468 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.501 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.379 |
| SRR2868004 | Drought Stress (root) | 2.194 |
| SRR2967015 | Control (root) | 1.906 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.862 |
| SRR9715740 | Leaf | 0.482 |
| SRR9715741 | Leaf | 0.647 |
| SRR9715739 | Root | 0.607 |
| SRR9715742 | Root | 0.494 |
| SRR9715743 | Root | 0.836 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.471 |
| SRR8749028 | MeJA induced 9h | 0.416 |
| SRR8749029 | MeJA induced 9h | 1.098 |
| SRR8749030 | Uninduced | 0.187 |
| SRR8749031 | Uninduced | 0.136 |
| SRR8749032 | Uninduced | 0.471 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.677 |
| SRR8400027 | Control - Root | 1.855 |