Gene detail information of Glyur000001s00000109 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G54860.1 | 1.00E-30 | Glycoprotein membrane precursor GPI-anchored |
| NR | KHN16132.1 | 1.62E-94 | Putative GPI-anchored protein [Glycine soja] |
| Swissprot | tr|Q84MC0|UGPI4_ARATH | 3.00E-36 | Uncharacterized GPI-anchored protein At3g06035 (Precursor) |
| trEMBL | tr|I1LBD2|I1LBD2_SOYBN | 1.00E-94 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G29620.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00001 | 583836 | 584766 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.829 |
| SRR1783600 | control | 1.782 |
| SRR1783602 | moderate drought stress | 1.581 |
| SRR1811619 | moderate drought stress | 1.556 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.681 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.527 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.997 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.007 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.887 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.880 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.442 |
| SRR2868004 | Drought Stress (root) | 14.222 |
| SRR2967015 | Control (root) | 13.122 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.679 |
| SRR9715740 | Leaf | 0.159 |
| SRR9715741 | Leaf | 0.354 |
| SRR9715739 | Root | 2.114 |
| SRR9715742 | Root | 5.115 |
| SRR9715743 | Root | 4.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.045 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.064 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.294 |
| SRR8400027 | Control - Root | 7.035 |