Gene detail

Gene detail information of Glyur000001s00000101

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G27550.1	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein
NR	XP_004495728.1	0	PREDICTED: kinesin-4-like [Cicer arietinum]
Swissprot	tr\|O81635\|ATK4_ARATH	5.00E-87	Kinesin-4
trEMBL	tr\|G7I841\|G7I841_MEDTR	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000001s00000101.1
ATGAACAACGATCGAAGCACTCAAATTCAAATGCTGGCTGAAAAATTTCACCGCTTCGTTCTCGACTGCGAACTCAAGCAGTCATCGTCAACCGCTCACCGCTCAGATAATATATCGAAACAAGTGAACGACAACTCTGATTCCGTGGATGAAAACAGCATGTCCAATGAAATCCATCAAATTTCCCCGGATCAGGATCACACGCTTCCGATTTTGAAGAAAATCCTTAATCTCAGTACAAAAATTCAGGATTTGAAGAAGCAGCACGTGGCCTTGTCTGATCAAGCGAAACTGGCANCTGAATCCTTTCCAGGCCTTGATGTTTTGAATTCTATTCAGCTTCTTGGTGCCGAATACGAAAACTTGAAAAGAAAGTACCTGGAGGAATCCTCTGAGCGCAGGCGGCTTTACAATGAAGTAATTGAACTCAAGGGAAATATCAGGGTTTTCTGCAGATGCAGGCCGTTAAGTGAAAGTGAAATTGCAAACGGGTCTGCAACTGTTGTCAATTTTGAATCATCTTCTGACAATGAGCTTCAACTCATTTGCTCAGATTCTTCTAAGAAGCAGTTTAAATTTGATTATGTATTTAGGCCCGAAGATAACCAAGAGGCTGTTTTTTCACAAACTAAACCTATTGTTACGTCAGTATTGGATGGGTTTAATGTGTGCATATTTGCCTATGGGCAAACTGGAACTGGTAAAACATTCACAATGGAGGGAACACCAGAAGAGAGGGGAGTTAACTACAGAACACTGAAGGAATTATTTCGGATATCTGAAGAGAGGAAGGGTGTAATGAAGTATGAATTACATGTTAGCATGTTGGAGGTTTACAATGAGAAGATAAGAGATCTTTTGGTGGAAAATTCTACCCAACCTACTAAGAAATTGGAGATAAAGCAAGCTGCAGAAGGAACCCAAGAAGTCCCAGGACTTGTTGAAGCTCGTGTTTATGGAACAGAAGATGTGTGGGAATTGCTCAAGACTGGAAACCGAGTCAGATCTGTTGGATCCACCTGTGCTAATGAGCTTAGCAGCCGTTCTCATTGCTTGTTGCGAGTAACTGTTATGGGGGAGAATTTAATCAATGGCCAGAAAACAAGGAGTCACCTTTGGCTAGTAGACTTAGCTGGTAGTGAGCGTGTGGGAAAAACTGAAGCTGAAGGAGAAAGACTGAAGGAATCTCAATTCATAAATAAAAACTCGAAGCTCACTCATATACTGCAGAGCTCTTTAGGAGGAGATTGCAAAACGTTAATGTTTGTCCAGGTAAGTCCAAGCGCAGCAGACTTAGGAGAGACACTTTGTTCACTGAATTTTGCCACCCGTGTCCGTGGAATCGAGAGTGGCCCAGCTCGCAAGCAAGTAGACCTCACTGAGCTGTTCAAGTACAAGCAAATGGCAGAAAAGGTCAAACACGACGAGAAGGAAACTAAGAAATTACAGGATAGTTTGCAAACCTTGCAACTCAGACTTGCTGCGAGAGAACACCATTGTAGAACCCTTCAGGAAAAGGTACGGGACCTTGAGAACCAGGTAGCAGAAGAAAGAAAAACAAGACTAAAGCAAGAAAACAGATCACTTGCTTCTGTTTCNGCTCAACCTTCATCATTCAAACACACAGCAGCTCATAAAACCATGACAGACAAGAAGCCACCACTGAATCCTTCGAAACTAAGAATGCCACTTAGAAGAATAAGTACTAATTTCTTGCCTCCTCCAACTCCTCTAACATCAAAGAGATATACACCTTTCATGAATGGAAAGGAAAATTCTGCCAGAAGGACCTCAATGACAACAANAAGAAGTTCAGAAGGCTTTGCAAGACCAAGAAACAGCAGGGCATCCATTGCCATGAGACCACCTGTACAATCAACAACGCAGCTCCTTCAGCCAAGGAGGCGAGTCTCCATTGCTACACTCCGTCCTGATTCAACCTCTGATATAACAACTCCACTCCGTACCTCGGCCTCCCGATTTACCAGTGGATCACTGATGAGGAGCCAAAGAAAAAGTCGGTATTCAAGTTTGTTTGCACCATCATTGCCAGAGTTGAGAGCATCGGTTGAGACAACACCAACTTCTTTTAGGAACAGCAGCAGCAAGTTTATGGGCAGTCCATCACAGGCACAGGCAGGATCAAGGGTTGGTAGGCATCCAGCCGTCCTTGCGCTGCAACGGAGATCTGTTGTCTGGAGTCCTCTCAAGCTGAGAGGCTTGACAAGTAACCGAAAGTCATCACTCTTGCCATCCCAAATGCGATAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00001	540298	544102	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000001s00000101.1	PF00225.18	Kinesin	152	401	6.10E-76

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.098
SRR1783600	control	2.023
SRR1783602	moderate drought stress	1.590
SRR1811619	moderate drought stress	1.523

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.110
DRR006520	Root Summer glycyrrhizin high producing strain	3.174
DRR006521	Root Winter glycyrrhizin high producing strain	0.098
DRR006522	Root Winter glycyrrhizin high producing strain	0.047
DRR006523	Root Summer glycyrrhizin low producing strain	1.174
DRR006524	Root Summer glycyrrhizin low producing strain	1.207
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.837
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.794

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	10.149
SRR2868004	Drought Stress (root)	4.188
SRR2967015	Control (root)	5.236

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.853
SRR9715740	Leaf	0.242
SRR9715741	Leaf	0.529
SRR9715739	Root	0.281
SRR9715742	Root	0.864
SRR9715743	Root	1.043

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	14.188
SRR8749028	MeJA induced 9h	8.883
SRR8749029	MeJA induced 9h	5.517
SRR8749030	Uninduced	0.522
SRR8749031	Uninduced	0.829
SRR8749032	Uninduced	0.614

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.913
SRR8400027	Control - Root	5.023