Gene detail information of Glyur000001s00000100 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G05330.1 | 2.00E-52 | cyclin family |
| NR | XP_006606515.1 | 3.32E-144 | PREDICTED: microtubule-binding protein TANGLED-like [Glycine max] |
| Swissprot | tr|Q84M91|TANB_ARATH | 6.00E-77 | Probable microtubule-binding protein TANGLED |
| trEMBL | tr|I1NIZ5|I1NIZ5_SOYBN | 1.00E-144 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G37790.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00001 | 537405 | 539088 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.287 |
| SRR1783600 | control | 3.422 |
| SRR1783602 | moderate drought stress | 1.831 |
| SRR1811619 | moderate drought stress | 1.906 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.602 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.141 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.723 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.815 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.440 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.358 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.086 |
| SRR2868004 | Drought Stress (root) | 6.472 |
| SRR2967015 | Control (root) | 7.644 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.767 |
| SRR9715740 | Leaf | 0.028 |
| SRR9715741 | Leaf | 0.771 |
| SRR9715739 | Root | 0.830 |
| SRR9715742 | Root | 1.223 |
| SRR9715743 | Root | 1.221 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.035 |
| SRR8749028 | MeJA induced 9h | 7.006 |
| SRR8749029 | MeJA induced 9h | 9.122 |
| SRR8749030 | Uninduced | 0.056 |
| SRR8749031 | Uninduced | 0.091 |
| SRR8749032 | Uninduced | 0.267 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.989 |
| SRR8400027 | Control - Root | 7.903 |