Gene detail information of Glyur000001s00000064 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G15800.1 | 1.00E-31 | ralf-like 33 |
| NR | XP_004495709.1 | 5.57E-59 | PREDICTED: rapid alkalinization factor-like [Cicer arietinum] |
| Swissprot | tr|Q8L9P8|RLF33_ARATH | 2.00E-39 | Protein RALF-like 33 (Precursor) |
| trEMBL | tr|I1NJ14|I1NJ14_SOYBN | 2.00E-55 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G38020.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00001 | 348199 | 348573 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000001s00000064.1 | PF05498.6 | RALF | 63 | 123 | 9.80E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.584 |
| SRR1783600 | control | 6.821 |
| SRR1783602 | moderate drought stress | 6.636 |
| SRR1811619 | moderate drought stress | 7.048 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.339 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.979 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.893 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.865 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.316 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.096 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.011 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 78.775 |
| SRR2868004 | Drought Stress (root) | 81.112 |
| SRR2967015 | Control (root) | 72.999 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.031 |
| SRR9715740 | Leaf | 3.574 |
| SRR9715741 | Leaf | 4.453 |
| SRR9715739 | Root | 102.568 |
| SRR9715742 | Root | 48.490 |
| SRR9715743 | Root | 58.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 343.834 |
| SRR8749028 | MeJA induced 9h | 287.540 |
| SRR8749029 | MeJA induced 9h | 303.925 |
| SRR8749030 | Uninduced | 548.742 |
| SRR8749031 | Uninduced | 285.093 |
| SRR8749032 | Uninduced | 382.392 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.095 |
| SRR8400027 | Control - Root | 34.568 |