Gene detail information of Glyur000001s00000051 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G27830.1 | 9.00E-68 | |
| NR | XP_006588448.1 | 3.36E-177 | PREDICTED: uncharacterized protein LOC100795095 isoform X1 [Glycine max] |
| trEMBL | tr|I1LB90|I1LB90_SOYBN | 1.00E-177 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G29180.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00001 | 281749 | 284754 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000001s00000051.1 | PF03024.9 | Folate_rec | 34 | 177 | 2.50E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.416 |
| SRR1783600 | control | 17.199 |
| SRR1783602 | moderate drought stress | 23.119 |
| SRR1811619 | moderate drought stress | 22.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 28.435 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 28.301 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 29.302 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 29.271 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.441 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.155 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.739 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.609 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.487 |
| SRR2868004 | Drought Stress (root) | 35.342 |
| SRR2967015 | Control (root) | 43.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.479 |
| SRR9715740 | Leaf | 29.403 |
| SRR9715741 | Leaf | 22.165 |
| SRR9715739 | Root | 66.311 |
| SRR9715742 | Root | 40.240 |
| SRR9715743 | Root | 43.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.391 |
| SRR8749028 | MeJA induced 9h | 13.626 |
| SRR8749029 | MeJA induced 9h | 15.159 |
| SRR8749030 | Uninduced | 16.276 |
| SRR8749031 | Uninduced | 10.295 |
| SRR8749032 | Uninduced | 10.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 46.271 |
| SRR8400027 | Control - Root | 46.420 |