Gene detail information of Glyur000001s00000047 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G05600.1 | 4.00E-108 | alpha/beta-Hydrolases superfamily protein |
| NR | KHN20253.1 | 0 | Epoxide hydrolase 2 [Glycine soja] |
| COG | YP_003299257.1 | 5.00E-82 | alpha/beta hydrolase fold protein [Thermomonospora curvata DSM 43183] |
| trEMBL | tr|I1NJ31|I1NJ31_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G38140.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00001 | 274779 | 276150 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000001s00000047.1 | PF12697.2 | Abhydrolase_6 | 27 | 321 | 6.60E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 114.481 |
| SRR1783600 | control | 114.907 |
| SRR1783602 | moderate drought stress | 118.297 |
| SRR1811619 | moderate drought stress | 119.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 100.213 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 98.779 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 52.349 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 50.347 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.153 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.733 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 34.908 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 34.459 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 284.584 |
| SRR2868004 | Drought Stress (root) | 201.101 |
| SRR2967015 | Control (root) | 204.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 55.749 |
| SRR9715740 | Leaf | 34.496 |
| SRR9715741 | Leaf | 44.687 |
| SRR9715739 | Root | 157.480 |
| SRR9715742 | Root | 112.758 |
| SRR9715743 | Root | 119.553 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 67.417 |
| SRR8749028 | MeJA induced 9h | 69.819 |
| SRR8749029 | MeJA induced 9h | 73.882 |
| SRR8749030 | Uninduced | 12.669 |
| SRR8749031 | Uninduced | 9.321 |
| SRR8749032 | Uninduced | 20.269 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 175.341 |
| SRR8400027 | Control - Root | 185.013 |