Gene detail

Detail information of GWHGAAZE029491

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU33238.1	0	hypothetical protein MIMGU_mgv1a025286mg [Erythranthe guttata]
COG	YP_001192956.1	6E-34	two component regulator
Swissprot	tr\|Q9LT96\|Y5977_ARATH	0	Probable leucine-rich repeat receptor-like protein kinase At5g49770 (Precursor)
trEMBL	tr\|A0A022R0W1\|A0A022R0W1_ERYGU	0	Uncharacterized protein {ECO:0000313\|EMBL:EYU33238.1}
TAIR10	AT1G79620.1	0	Leucine-rich repeat protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	24109427	24118421	+
GWHAAZE00000009	mRNA	24109427	24118421	+
GWHAAZE00000009	exon	24109427	24109499	+
GWHAAZE00000009	exon	24110118	24110238	+
GWHAAZE00000009	exon	24110604	24110675	+
GWHAAZE00000009	exon	24110990	24111064	+
GWHAAZE00000009	exon	24111145	24111216	+
GWHAAZE00000009	exon	24111905	24112066	+
GWHAAZE00000009	exon	24112147	24112221	+
GWHAAZE00000009	exon	24112805	24112876	+
GWHAAZE00000009	exon	24112977	24113048	+
GWHAAZE00000009	exon	24113139	24113207	+
GWHAAZE00000009	exon	24113294	24113368	+
GWHAAZE00000009	exon	24113666	24113800	+
GWHAAZE00000009	exon	24114461	24114945	+
GWHAAZE00000009	exon	24115278	24115436	+
GWHAAZE00000009	exon	24115520	24115656	+
GWHAAZE00000009	exon	24116024	24116197	+
GWHAAZE00000009	exon	24117948	24118421	+
GWHAAZE00000009	CDS	24109427	24109499	+
GWHAAZE00000009	CDS	24110118	24110238	+
GWHAAZE00000009	CDS	24110604	24110675	+
GWHAAZE00000009	CDS	24110990	24111064	+
GWHAAZE00000009	CDS	24111145	24111216	+
GWHAAZE00000009	CDS	24111905	24112066	+
GWHAAZE00000009	CDS	24112147	24112221	+
GWHAAZE00000009	CDS	24112805	24112876	+
GWHAAZE00000009	CDS	24112977	24113048	+
GWHAAZE00000009	CDS	24113139	24113207	+
GWHAAZE00000009	CDS	24113294	24113368	+
GWHAAZE00000009	CDS	24113666	24113800	+
GWHAAZE00000009	CDS	24114461	24114945	+
GWHAAZE00000009	CDS	24115278	24115436	+
GWHAAZE00000009	CDS	24115520	24115656	+
GWHAAZE00000009	CDS	24116024	24116197	+
GWHAAZE00000009	CDS	24117948	24118421	+

Transcript Sequence
>GWHTAAZE029525 ATGGGTCGAAGATTTCTGTTCTGTCTTCTGGTTATTTCCATCCAACTTTTAGTCATAGCAGCACAGAGTGATTCTACTTATCTATTGGCTCTAAAGGATGTATGGGAGAACACACCACCCAATTGGGTTGGCACGGATCCATGTGGAGATCGCTGGGAAGGAATCGGTTGCACCAACTCGCGTGTTACTTCAATAACATTATCAAGCATGAGTTTGACTGGTACACTATCCGGAGACATCCAGTATTTCTCCGAATTGCAGACTCTGGATCTCTCATACAATACAGGTTTGACTGGACCTATTCCTCCAGCAATTGGAAATTTGAGGAAGTTATCAAATTTAATCCTGGTTGGTTGCCGTTTCACGGGTCCAATTCCAGACTCGATAGGATCTCTTCAGCAGCTGGTGTTTTTGTCTCTAAATAGTAATGGCTTCAGTGGACCAATACCGCCTTCAATTGGTAATCTAACTAATCTTTATTGGTTGGATTTGGCCGATAATGACCTTAGCGGACCAATACCAGTTTCTAATGGAAGCAGTCCTGGACTCGATATGCTGGTTGAAACAAAGCACTTTCATTTAGGAAAGAATCGGCTTTCTGGTGAGATCCCACGTCAGCTCTTCAGCTCGTCTTTGACCTTAATACATCTGCTTTTAGAGAACAACCAGCTTACCGGCAGCATTCCTTCCACACTAGGGCTTGTGCAGACCTTGGAGGTGGTTCGGCTCGATAGGAATTTGTTAACTGGACCTGTTCCATCAAACATCAACAACCTTAGCCGTGTCAATGATCTGTTCCTGTCCAATAATAGACTGACTGGCGCGTTGCCTGATCTTACGGGCATGGACTTCCTCCACTATGTGGATCTGAGCAATAATACTTTTGACAATTCTGATGTTCCTTCGTGGTTTTCAACCTTACAATCTTTGACAACATTTGTATTGAGAAATAACCAGCTTAATGGCACCTTGGATATTGGGGCCAGCTATAGCAGCCAACTTCAAGAGGTTGATTTGCAGAATAATCTCATCAGTGGCTTCACACAAAGGGCGGGAAACAATATTGGGTTAACACTTGCTGGTAATCCTGTTTGTGAAGAATCAGGAGGAATAGACGAAAATTACTGTAATGTTACTCAACAGCCTAATGACTCGTATTCAACATTACCAAGAAATTGTGTGCCTAGTACCTGCAGCTCAGACCAAATTTCGAGCCCGAATTGTCAATGTGCATATCCATACACAGGGAAAATATCATTTAGAGCTCCTACGTTTTCCAGCCTGGGAAATTCGAGTATTTACATTTCTCTTCAAGAATCTATGATGGCTTCTTTTCAGTCCCATCGACTCCCAGTGGATTCGGTCTCTCTGAGAAATCCGACAACAGATCTTGACGATTACCTTGTAATAAGCCTTGAAGTTTTTCCATTCGGCCAAGATTATTTCAATCGAACAGGAGTTAGTGGGATTGGATTTGTGCTTAGCAACCAAACTTTTAAGCCTCCAGATAATTTTGGACCTTTTTTTTTCATTGGTGACGGCTATCAGTACTTTTCAGGTCCTAGAACAGCACAGAAGTCATCATCAAATACCGGCATTATCATCGGAGCAGCAGCTGGTGGGACTGGCCTTTTCCTATTACTACTACTTGCAGGATTTTACGCTTATCGTCAAAAGAGAAGGGCCGAAAGAGCTGATCATCAGAACAATCCCTTTGCATTGTGGGACCCAAGTAAAAACAGTGGCGGCGTTCCTCAGTTAAAAGGAGCAAGGTCTTTCTCATTTGAAGAACTTAAGAAATACACAAATAGTTTTTCAGAAACCAACAATATTGGATCCGGCGGCTACGGAATGGTATATAGAGGAAATCTTCCCAATGGGCAATTGATTGCCATTAAAAGAGCCGTACAAGGGTCTACGCAGGGTGGCCTTGAGTTTAAAACCGAAATTGAGCTCCTTTCGAGGGTTCATCACAAAAATGTTGTCAGCCTCGTGGGTTTCTGTTTCGAGCAAGGTGAACAGATGCTGGGCTACATGGACCCTGAATATTACATGACCCAACAATTAACTGAAAAGAGCGATGTTTACAGTTTCGGAGTTGTGCTGTTGGAGTTAATAACAGCGAGACCTCCTATACATCAAGGGAAGTATATTGTAAGAGAGGTGAGGCAATCAATGGACAGAGCAAAAGATCTATACAACCTTCAAGGAGTTCTTGACCCCAGCATTGGCCAGTTCACAGATCTCAGGGGCTTAGAGAAATTTGTTGATGTTTCAATGAGGTGTGTTGAAGAGGCCGGGTCCCACAGACCTGCGATGAGCGAGGTGGTGAAAGAGATAGAGAACGCCATGGAGATGGCGGGCTTGAATCCGAATGTTGAATCGGCTTCGACTTCAGCAAGTTATGAAGGAGTAAGTAAGGGATATGAACATCCTTATAGTAATGAAAGCCTTTTTGTTTATAGTGGTGCTTATCTCCCTTCAAAGTTGGAGCCCAAGTGA

Network for GWHGAAZE029491

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	608	675	1.30E-07
PF07714.18	PK_Tyr_Ser-Thr	676	779	5.10E-07

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_LRR-VIII-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0005524	molecular_function	ATP binding
GO:0004672	molecular_function	protein kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	7.936
	SRR3591706	second leaf	8.059
	SRR3591707	mature leaf	10.222
	SRR3591708	Shoot apex	10.632
	SRR3591709	Stem	9.571
	SRR3591710	White floral bud	8.252
	SRR3591711	White flower	11.239
	SRR3591712	Green floral bud	10.367
	SRR3591713	Yellow flower	5.801
SRP173429	SRR8316895	Juvenile bud stage	8.655
	SRR8316896	Juvenile bud stage	11.197
	SRR8316897	Juvenile bud stage	5.254
	SRR8316894	Third green stage	3.759
	SRR8316900	Third green stage	7.826
	SRR8316901	Third green stage	9.671
	SRR8316898	Complete white stage	3.541
	SRR8316899	Complete white stage	14.274
	SRR8316903	Complete white stage	4.684
	SRR8316902	Silver flowering stage	3.010
	SRR8316904	Silver flowering stage	3.970
	SRR8316905	Silver flowering stage	1.981
	SRR8316906	Gold flowering stage	13.780
	SRR8316907	Gold flowering stage	7.655
	SRR8316908	Gold flowering stage	14.748
SRP132670	SRR6706286	Control	5.868
	SRR6706287	Light intensity 50%	6.329
	SRR6706288	Light intensity 20%	7.155
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	5.364
	CNS0095593	Slightly white alabastrum(diploid) 2	5.084
	CNS0095594	Slightly white alabastrum(diploid) 3	5.250
	CNS0095595	Whole white alabastrum(diploid) 2	5.283
	CNS0095596	Whole white alabastrum(diploid) 3	1.502
	CNS0095597	Whole white alabastrum(diploid) 4	3.714
	CNS0095598	Silvery flower (diploied) 1	10.053
	CNS0095599	Silvery flower (diploied) 2	5.546
	CNS0095600	Silvery flower (diploied) 3	9.125
	CNS0095601	Golden flower (diploid) 1	6.937
	CNS0095602	Golden flower (diploid) 2	11.969
	CNS0095603	Golden flower (diploid) 3	12.437
	CNS0095604	Slightly white alabastrum(tetraploid) 1	4.710
	CNS0095605	Slightly white alabastrum(tetraploid) 2	3.345
	CNS0095606	Slightly white alabastrum(tetraploid) 3	12.970
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.935
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.757
	CNS0095609	Whole white alabastrum(tetraploid) 3	6.577
	CNS0095610	Silvery flower (tetraploid) 1	8.195
	CNS0095611	Silvery flower (tetraploid) 2	8.366
	CNS0095612	Silvery flower (tetraploid) 3	5.309
	CNS0095613	Golden flower (tetraploid) 1	4.200
	CNS0095614	Golden flower (tetraploid) 2	7.967
	CNS0095615	Golden flower (tetraploid) 3	2.086
CRA001975	CRR073297	Stem 1	9.200
	CRR073298	Stem 2	5.769
	CRR073299	Stem 3	5.664
	CRR073300	Leaf 1	6.210
	CRR073301	Leaf 2	5.384
	CRR073302	Leaf 3	4.657
	CRR073303	Juvenile bud 1	3.924
	CRR073304	Juvenile bud 2	5.994
	CRR073305	Juvenile bud 3	3.307
	CRR073306	Third green 1	0.894
	CRR073307	Third green 2	0.715
	CRR073308	Third green 3	0.637
	CRR073309	Second white 1	1.683
	CRR073310	Second white 2	1.407
	CRR073311	Second white 3	1.292
	CRR073312	Silver flowering 1	2.329
	CRR073313	Silver flowering 2	2.284
	CRR073314	Silver flowering 3	2.645
	CRR073315	Gold flowering 1	1.295
	CRR073316	Gold flowering 2	3.240
	CRR073317	Gold flowering 3	2.792
	CRR073318	Tawny withering 1	13.532
	CRR073319	Tawny withering 2	16.588
	CRR073320	Tawny withering 3	12.227