Detail information of GWHGAAZE033306


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011098792.10PREDICTED: very-long-chain 3-oxoacyl-CoA reductase 1-like [Sesamum indicum]
COGYP_006528720.13E-27short-chain dehydrogenase/reductase SDR
Swissprottr|Q8L9C4|KCR1_ARATH2E-163Very-long-chain 3-oxoacyl-CoA reductase 1
trEMBLtr|M5XDF7|M5XDF7_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ23959.1}
TAIR10AT1G67730.13E-121beta-ketoacyl reductase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000094gene45108714513337-
GWHAAZE00000094mRNA45108714513337-
GWHAAZE00000094exon45108714511128-
GWHAAZE00000094exon45116484511717-
GWHAAZE00000094exon45127004513337-
GWHAAZE00000094CDS45127004513337-
GWHAAZE00000094CDS45116484511717-
GWHAAZE00000094CDS45108714511128-
Transcript Sequence

Network for GWHGAAZE033306

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00106.26adh_short552473.20E-39
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K10251HSD17B12, KAR, IFA38 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Fatty acid metabolismmap01212
Fatty acid elongationmap00062
Steroid hormone biosynthesismap00140
Biosynthesis of unsaturated fatty acidsmap01040

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf31.915
SRR3591706second leaf89.002
SRR3591707mature leaf22.734
SRR3591708Shoot apex62.632
SRR3591709Stem19.630
SRR3591710White floral bud31.291
SRR3591711White flower15.649
SRR3591712Green floral bud64.394
SRR3591713Yellow flower7.851
SRP173429 SRR8316895Juvenile bud stage 26.898
SRR8316896Juvenile bud stage 35.477
SRR8316897Juvenile bud stage 19.179
SRR8316894Third green stage 17.384
SRR8316900Third green stage 54.735
SRR8316901Third green stage 53.176
SRR8316898Complete white stage 17.289
SRR8316899Complete white stage 53.205
SRR8316903Complete white stage 25.804
SRR8316902Silver flowering stage9.241
SRR8316904Silver flowering stage8.675
SRR8316905Silver flowering stage3.266
SRR8316906Gold flowering stage 7.942
SRR8316907Gold flowering stage 3.999
SRR8316908Gold flowering stage 7.839
SRP132670SRR6706286Control39.518
SRR6706287Light intensity 50%43.375
SRR6706288Light intensity 20%47.142
CNP0000432CNS0095592Slightly white alabastrum(diploid) 123.580
CNS0095593Slightly white alabastrum(diploid) 227.656
CNS0095594Slightly white alabastrum(diploid) 328.911
CNS0095595Whole white alabastrum(diploid) 227.243
CNS0095596Whole white alabastrum(diploid) 331.863
CNS0095597Whole white alabastrum(diploid) 428.134
CNS0095598Silvery flower (diploied) 115.390
CNS0095599Silvery flower (diploied) 210.186
CNS0095600Silvery flower (diploied) 314.615
CNS0095601Golden flower (diploid) 19.684
CNS0095602Golden flower (diploid) 27.908
CNS0095603Golden flower (diploid) 37.395
CNS0095604Slightly white alabastrum(tetraploid) 139.413
CNS0095605Slightly white alabastrum(tetraploid) 231.904
CNS0095606Slightly white alabastrum(tetraploid) 349.633
CNS0095607Whole white alabastrum(tetraploid) 124.395
CNS0095608Whole white alabastrum(tetraploid) 227.484
CNS0095609Whole white alabastrum(tetraploid) 344.585
CNS0095610Silvery flower (tetraploid) 19.455
CNS0095611Silvery flower (tetraploid) 26.271
CNS0095612Silvery flower (tetraploid) 35.057
CNS0095613Golden flower (tetraploid) 14.189
CNS0095614Golden flower (tetraploid) 211.696
CNS0095615Golden flower (tetraploid) 32.614
CRA001975CRR073297Stem 130.878
CRR073298Stem 231.736
CRR073299Stem 335.387
CRR073300Leaf 142.023
CRR073301Leaf 245.278
CRR073302Leaf 342.317
CRR073303Juvenile bud 137.788
CRR073304Juvenile bud 245.608
CRR073305Juvenile bud 329.762
CRR073306Third green 15.737
CRR073307Third green 24.256
CRR073308Third green 34.922
CRR073309Second white 11.752
CRR073310Second white 20.951
CRR073311Second white 31.113
CRR073312Silver flowering 10.862
CRR073313Silver flowering 23.299
CRR073314Silver flowering 32.443
CRR073315Gold flowering 138.198
CRR073316Gold flowering 225.862
CRR073317Gold flowering 331.168
CRR073318Tawny withering 165.159
CRR073319Tawny withering 234.224
CRR073320Tawny withering 377.306