Detail information of GWHGAAZE033281


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007214987.10hypothetical protein PRUPE_ppa002024mg [Prunus persica]
trEMBLtr|M5WSJ7|M5WSJ7_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ16186.1}
TAIR10AT5G19130.10GPI transamidase component family protein / Gaa1-like family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000094gene42040524206392-
GWHAAZE00000094mRNA42040524206392-
GWHAAZE00000094exon42054964206392-
GWHAAZE00000094exon42052034205327-
GWHAAZE00000094exon42040524204868-
GWHAAZE00000094CDS42054964206392-
GWHAAZE00000094CDS42052034205327-
GWHAAZE00000094CDS42040524204868-
Transcript Sequence

Network for GWHGAAZE033281

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04114.15Gaa1656041.00E-113
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05289GAA1 Metabolic pathways map01100
Glycosylphosphatidylinositolmap00563

Gene Ontology

GO term OntologyName
GO:0016021cellular_componentintegral component of membrane
GO:0042765cellular_componentGPI-anchor transamidase complex

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf19.267
SRR3591706second leaf10.705
SRR3591707mature leaf7.590
SRR3591708Shoot apex16.614
SRR3591709Stem15.774
SRR3591710White floral bud16.950
SRR3591711White flower20.681
SRR3591712Green floral bud20.028
SRR3591713Yellow flower16.588
SRP173429 SRR8316895Juvenile bud stage 9.473
SRR8316896Juvenile bud stage 14.357
SRR8316897Juvenile bud stage 6.991
SRR8316894Third green stage 5.812
SRR8316900Third green stage 16.840
SRR8316901Third green stage 13.458
SRR8316898Complete white stage 7.905
SRR8316899Complete white stage 18.589
SRR8316903Complete white stage 13.019
SRR8316902Silver flowering stage8.614
SRR8316904Silver flowering stage11.773
SRR8316905Silver flowering stage4.584
SRR8316906Gold flowering stage 16.428
SRR8316907Gold flowering stage 18.627
SRR8316908Gold flowering stage 17.806
SRP132670SRR6706286Control7.684
SRR6706287Light intensity 50%8.837
SRR6706288Light intensity 20%9.963
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.185
CNS0095593Slightly white alabastrum(diploid) 210.181
CNS0095594Slightly white alabastrum(diploid) 312.472
CNS0095595Whole white alabastrum(diploid) 210.305
CNS0095596Whole white alabastrum(diploid) 310.656
CNS0095597Whole white alabastrum(diploid) 411.346
CNS0095598Silvery flower (diploied) 18.009
CNS0095599Silvery flower (diploied) 29.389
CNS0095600Silvery flower (diploied) 319.591
CNS0095601Golden flower (diploid) 18.289
CNS0095602Golden flower (diploid) 216.489
CNS0095603Golden flower (diploid) 316.131
CNS0095604Slightly white alabastrum(tetraploid) 114.588
CNS0095605Slightly white alabastrum(tetraploid) 211.983
CNS0095606Slightly white alabastrum(tetraploid) 319.436
CNS0095607Whole white alabastrum(tetraploid) 19.564
CNS0095608Whole white alabastrum(tetraploid) 29.372
CNS0095609Whole white alabastrum(tetraploid) 315.117
CNS0095610Silvery flower (tetraploid) 121.112
CNS0095611Silvery flower (tetraploid) 220.509
CNS0095612Silvery flower (tetraploid) 319.755
CNS0095613Golden flower (tetraploid) 19.110
CNS0095614Golden flower (tetraploid) 220.364
CNS0095615Golden flower (tetraploid) 319.095
CRA001975CRR073297Stem 113.334
CRR073298Stem 29.243
CRR073299Stem 313.427
CRR073300Leaf 111.049
CRR073301Leaf 28.367
CRR073302Leaf 310.501
CRR073303Juvenile bud 111.724
CRR073304Juvenile bud 210.928
CRR073305Juvenile bud 314.358
CRR073306Third green 17.677
CRR073307Third green 27.702
CRR073308Third green 38.392
CRR073309Second white 115.301
CRR073310Second white 210.833
CRR073311Second white 310.754
CRR073312Silver flowering 112.094
CRR073313Silver flowering 219.909
CRR073314Silver flowering 313.589
CRR073315Gold flowering 18.038
CRR073316Gold flowering 27.691
CRR073317Gold flowering 38.347
CRR073318Tawny withering 112.486
CRR073319Tawny withering 28.020
CRR073320Tawny withering 310.904