Gene detail

Detail information of GWHGAAZE033145

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CBI22219.3	1.6933E-129	unnamed protein product [Vitis vinifera]
Swissprot	tr\|P81392\|MYB06_ANTMA	1E-107	Myb-related protein 306
trEMBL	tr\|F6H5T6\|F6H5T6_VITVI	2E-129	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB47557.1}
TAIR10	AT3G47600.1	4E-80	myb domain protein 94

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000094	gene	1802038	1803604	-
GWHAAZE00000094	mRNA	1802038	1803604	-
GWHAAZE00000094	exon	1802038	1802683	-
GWHAAZE00000094	exon	1803092	1803221	-
GWHAAZE00000094	exon	1803472	1803604	-
GWHAAZE00000094	CDS	1803472	1803604	-
GWHAAZE00000094	CDS	1803092	1803221	-
GWHAAZE00000094	CDS	1802038	1802683	-

Transcript Sequence
>GWHTAAZE033184 ATGGGTAGATTGCCCTGTTGTGATAAACTTGGAGTGAAGAAAGGACCATGGACTCCTGAGGAAGATATAACGTTGGTCTCTTATGTTCAAGAACATGGCCCTGGTAATTGGAGGGCTGTTCCTACAAATACAGGTTTGAAGAGATGCAGTAAGAGTTGTCGGCTTAGATGGACTAATTACTTGAGGCCAGGGATCAAAAGGGGTGACTTTACTGATGAAGAGGAAAAGATGATTATTCAACTTCAATCCCTTTTGGGCAACAAGTGGGCCGCAATAGCATCATACCTCCCGGAGCGAACAGACAATGACATAAAGAACCACTGGAACACGCACTTGAAGAAAAAGTTAATGAAAACCCAACAAAAATGCTCTTCTGTAAACTATAAAGACGGATTAACTTATTCACACTCAATTTCAAGAGGCCAGTGGGAGAGACGACTTCAAACCAATATCCACACGGCCAAACAAGCCCTATCAGATGCTTTATCCTTGGACAAGCCGACTTTTACCCCTACACAAACATGTACTTACGCGTCTAGCACTGAGAACATAGCTAGAATGCTTAAGAATTGGAACCAAAATACGCGCAATGTTAAGGCCTTGCAGTCGAATTCTTCGAGTACGCAACATTCGTTCAATTATGAAGTAGGCGAGAGTGACAAAAGCAAAATTGGGTTGGATTTATCCGAAGCGTTCGAGTCTTTGTTTGGGTTCGAGTCATTTGATTCGAATTCGGAATTTTCTCAGTCTAATAATACGTCTCCGGAGGGTAGTTTTTTCCAAGGGGAAAGTAAGCCACTGCTAAGTGGTCAAGTCCCAATTGAAATGTTTGAGAATTGGCTTATTGATGAAAGTGTTATTGAAGGGAAAGAGGATTTGAGTAGCTTCTCATTTGATGATATATGCTGA

Network for GWHGAAZE033145

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00249.32	Myb_DNA-binding	14	61	7.80E-16
PF00249.32	Myb_DNA-binding	67	112	2.00E-14

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	MYB

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003677	molecular_function	DNA binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	15.136
	SRR3591706	second leaf	37.584
	SRR3591707	mature leaf	29.953
	SRR3591708	Shoot apex	70.912
	SRR3591709	Stem	4.812
	SRR3591710	White floral bud	27.207
	SRR3591711	White flower	11.302
	SRR3591712	Green floral bud	53.479
	SRR3591713	Yellow flower	1.320
SRP173429	SRR8316895	Juvenile bud stage	24.967
	SRR8316896	Juvenile bud stage	33.043
	SRR8316897	Juvenile bud stage	16.742
	SRR8316894	Third green stage	13.625
	SRR8316900	Third green stage	43.736
	SRR8316901	Third green stage	48.142
	SRR8316898	Complete white stage	5.035
	SRR8316899	Complete white stage	100.560
	SRR8316903	Complete white stage	9.220
	SRR8316902	Silver flowering stage	0.974
	SRR8316904	Silver flowering stage	0.640
	SRR8316905	Silver flowering stage	0.313
	SRR8316906	Gold flowering stage	0.192
	SRR8316907	Gold flowering stage	0.260
	SRR8316908	Gold flowering stage	0.728
SRP132670	SRR6706286	Control	40.555
	SRR6706287	Light intensity 50%	47.546
	SRR6706288	Light intensity 20%	53.311
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	21.364
	CNS0095593	Slightly white alabastrum(diploid) 2	22.228
	CNS0095594	Slightly white alabastrum(diploid) 3	24.987
	CNS0095595	Whole white alabastrum(diploid) 2	17.369
	CNS0095596	Whole white alabastrum(diploid) 3	11.228
	CNS0095597	Whole white alabastrum(diploid) 4	20.791
	CNS0095598	Silvery flower (diploied) 1	36.311
	CNS0095599	Silvery flower (diploied) 2	21.225
	CNS0095600	Silvery flower (diploied) 3	6.097
	CNS0095601	Golden flower (diploid) 1	13.690
	CNS0095602	Golden flower (diploid) 2	12.146
	CNS0095603	Golden flower (diploid) 3	12.015
	CNS0095604	Slightly white alabastrum(tetraploid) 1	15.863
	CNS0095605	Slightly white alabastrum(tetraploid) 2	12.014
	CNS0095606	Slightly white alabastrum(tetraploid) 3	38.816
	CNS0095607	Whole white alabastrum(tetraploid) 1	5.043
	CNS0095608	Whole white alabastrum(tetraploid) 2	4.208
	CNS0095609	Whole white alabastrum(tetraploid) 3	24.835
	CNS0095610	Silvery flower (tetraploid) 1	1.252
	CNS0095611	Silvery flower (tetraploid) 2	2.097
	CNS0095612	Silvery flower (tetraploid) 3	1.462
	CNS0095613	Golden flower (tetraploid) 1	0.120
	CNS0095614	Golden flower (tetraploid) 2	0.388
	CNS0095615	Golden flower (tetraploid) 3	0.983
CRA001975	CRR073297	Stem 1	38.231
	CRR073298	Stem 2	34.534
	CRR073299	Stem 3	21.192
	CRR073300	Leaf 1	56.343
	CRR073301	Leaf 2	43.014
	CRR073302	Leaf 3	35.226
	CRR073303	Juvenile bud 1	35.324
	CRR073304	Juvenile bud 2	43.400
	CRR073305	Juvenile bud 3	26.846
	CRR073306	Third green 1	3.782
	CRR073307	Third green 2	3.933
	CRR073308	Third green 3	4.479
	CRR073309	Second white 1	0.264
	CRR073310	Second white 2	0.247
	CRR073311	Second white 3	0.001
	CRR073312	Silver flowering 1	0.226
	CRR073313	Silver flowering 2	0.176
	CRR073314	Silver flowering 3	0.178
	CRR073315	Gold flowering 1	13.877
	CRR073316	Gold flowering 2	9.263
	CRR073317	Gold flowering 3	5.428
	CRR073318	Tawny withering 1	0.412
	CRR073319	Tawny withering 2	0.557
	CRR073320	Tawny withering 3	0.852