Detail information of GWHGAAZE032992


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007149200.12.93743E-98hypothetical protein PHAVU_005G050000g [Phaseolus vulgaris]
Swissprottr|Q8LCG7|NFYC2_ARATH3E-72Nuclear transcription factor Y subunit C-2
trEMBLtr|V7BTC1|V7BTC1_PHAVU1E-98Uncharacterized protein {ECO:0000313|EMBL:ESW21194.1}
TAIR10AT1G56170.23E-56nuclear factor Y, subunit C2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000081gene522934523659-
GWHAAZE00000081mRNA522934523659-
GWHAAZE00000081exon522934523659-
GWHAAZE00000081CDS522934523659-
Transcript Sequence

Network for GWHGAAZE032992

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00808.24CBFD_NFYB_HMF791426.60E-17
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNF-YC

KEGG pathway

KO Enzyme pathway mapID
K08066NFYC, HAP5 Antigen processing and presentation map04612

Gene Ontology

GO term OntologyName
GO:0046982molecular_functionprotein heterodimerization activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.567
SRR3591706second leaf0.580
SRR3591707mature leaf1.391
SRR3591708Shoot apex3.154
SRR3591709Stem1.185
SRR3591710White floral bud4.991
SRR3591711White flower10.571
SRR3591712Green floral bud3.994
SRR3591713Yellow flower8.745
SRP173429 SRR8316895Juvenile bud stage 5.307
SRR8316896Juvenile bud stage 7.489
SRR8316897Juvenile bud stage 3.032
SRR8316894Third green stage 4.867
SRR8316900Third green stage 7.433
SRR8316901Third green stage 7.382
SRR8316898Complete white stage 5.370
SRR8316899Complete white stage 7.241
SRR8316903Complete white stage 9.079
SRR8316902Silver flowering stage5.910
SRR8316904Silver flowering stage9.756
SRR8316905Silver flowering stage4.423
SRR8316906Gold flowering stage 13.344
SRR8316907Gold flowering stage 13.665
SRR8316908Gold flowering stage 13.400
SRP132670SRR6706286Control10.557
SRR6706287Light intensity 50%9.925
SRR6706288Light intensity 20%8.285
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.759
CNS0095593Slightly white alabastrum(diploid) 24.673
CNS0095594Slightly white alabastrum(diploid) 36.075
CNS0095595Whole white alabastrum(diploid) 24.315
CNS0095596Whole white alabastrum(diploid) 33.925
CNS0095597Whole white alabastrum(diploid) 43.795
CNS0095598Silvery flower (diploied) 19.790
CNS0095599Silvery flower (diploied) 29.007
CNS0095600Silvery flower (diploied) 318.260
CNS0095601Golden flower (diploid) 19.587
CNS0095602Golden flower (diploid) 212.838
CNS0095603Golden flower (diploid) 313.429
CNS0095604Slightly white alabastrum(tetraploid) 14.761
CNS0095605Slightly white alabastrum(tetraploid) 25.784
CNS0095606Slightly white alabastrum(tetraploid) 35.547
CNS0095607Whole white alabastrum(tetraploid) 12.563
CNS0095608Whole white alabastrum(tetraploid) 22.221
CNS0095609Whole white alabastrum(tetraploid) 34.927
CNS0095610Silvery flower (tetraploid) 115.644
CNS0095611Silvery flower (tetraploid) 217.216
CNS0095612Silvery flower (tetraploid) 319.255
CNS0095613Golden flower (tetraploid) 113.954
CNS0095614Golden flower (tetraploid) 211.655
CNS0095615Golden flower (tetraploid) 319.922
CRA001975CRR073297Stem 113.981
CRR073298Stem 213.887
CRR073299Stem 322.094
CRR073300Leaf 16.541
CRR073301Leaf 27.146
CRR073302Leaf 37.945
CRR073303Juvenile bud 16.973
CRR073304Juvenile bud 27.216
CRR073305Juvenile bud 39.495
CRR073306Third green 17.662
CRR073307Third green 210.831
CRR073308Third green 37.623
CRR073309Second white 115.867
CRR073310Second white 220.789
CRR073311Second white 313.361
CRR073312Silver flowering 117.348
CRR073313Silver flowering 221.403
CRR073314Silver flowering 315.982
CRR073315Gold flowering 11.375
CRR073316Gold flowering 22.781
CRR073317Gold flowering 35.101
CRR073318Tawny withering 14.158
CRR073319Tawny withering 24.112
CRR073320Tawny withering 33.973