Gene detail

Detail information of GWHGAAZE032488

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009626574.1	3.742E-179	PREDICTED: 3,9-dihydroxypterocarpan 6A-monooxygenase-like isoform X2 [Nicotiana tomentosiformis]
COG	YP_007323474.1	9E-37	cytochrome P450
Swissprot	tr\|Q42798\|C93A1_SOYBN	2E-124	3,9-dihydroxypterocarpan 6A-monooxygenase
trEMBL	tr\|B9T2D3\|B9T2D3_RICCO	9E-177	Cytochrome P450, putative {ECO:0000313\|EMBL:EEF29987.1}
TAIR10	AT2G42250.1	4E-118	cytochrome P450, family 712, subfamily A, polypeptide 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000021	gene	3285852	3289104	-
GWHAAZE00000021	mRNA	3285852	3289104	-
GWHAAZE00000021	exon	3285852	3286520	-
GWHAAZE00000021	exon	3287103	3287486	-
GWHAAZE00000021	exon	3288649	3289104	-
GWHAAZE00000021	CDS	3288649	3289104	-
GWHAAZE00000021	CDS	3287103	3287486	-
GWHAAZE00000021	CDS	3285852	3286520	-

Transcript Sequence
>GWHTAAZE032526 ATGGATGCTCCCTTCTACTTCACTATCTGCCTTATTTCCGCTCTCATAATCCGATCCTTGATTAAAAAACACCGAAACCTGAACAAAATCCTCCATAAACCCCCAAGTCCACCCTCTTTACCGATAATCGGCCACCTTCATTTACTAAGTCTACCACTGCCCCAATCATTTCGAACCTTAGCTTTACGCTATGGTTCCCTCATGAAGATTGATGTTGGCGCGTCGAGTTCGCTGATTGTGTCCAACGCTGCCGTGGCCAGAGAGGTCATGAAAACTAACGATCTGAATTTTGCGTATCGGCCGCAGTTTGGAGCTGCAGATTATGAAATATATAAGGAGTCGTCCTTTTTTGGGGCAGGGTATGGTGATTACTGGCGATTTTTGAAGAAAATATGCGTGACGGAGCTTCTCTCCCCTCATCAGATTGGACGATTCGTCGATATCAGAAAACAAGAGGTGATGAAACTGTTGGAAATTCTTCTCAAGCACTCGAAGGAAGGAAAAGAATGCGATCTCGGAGCAGAGTTGATGACGATGACAAACAACATAATATGTAGGATGACAATGAGCACGCGATGCTCTGCAAGTGAGAACGAGAGCAAAGAGATTAGAGACTTCATCAACGAGATAGCGAATTGTGCAGCCAAAATGAGCTTAGGGGAAGTTTGGGGTCCATTGAAAAAGTTTGATTTGCTTGGGTATGGAAGAAAGTTGAGGGAGTGTTTATGGAAGTTTGATGGGTTGGTTGAGAGGGTGATGAAGGAGCATGAGAAAGATAGGGAAGGAGGGGAAAAAGAGAGGAAAGATATGTTGGACCTTTTGTTGGGGATTTGTGAGGATGAAATTTTCATGGCAGGCACAGAAACAACGAGTGGAGCATTACAATGGATAATAGCAGAGATAATAAACCATCCAAATGTGTTCAAAGAACTCCGAGAGGAGATCAACTCTGTTGTGGGCCCCACTAGACTAGTCGAAGAATCGGACGTTCCAAATCTTCCCTACTTACAAGCCGTTGTCAAGGAAGGGTTGAGATTGCACCCACCATCACCGTTGATCCTTCGCCAATGCAAGGAAGACTGCAAGATCAACGGCTACGACGTGTTGGCAGATACAAGGATGATGATCAACTTATACGCAATCATGCGGGACCAGGACACGTGGGAAGATCCGAACGAGTTTGTACCCGAGAGGTTCATGGTAGGCTCCGCACAGGATCAAAACCGGTGTCAAGTTAATCTTGATTATATGCCATTTGGGGGCGGGAGGAGAGCATGCCCTGGTACTGCACTTGCATTGACCGTGATGCACATGATGATCGGACCGTTGGTTCAGTGCTTCGACTTGGAAGTCAAAGGTGGAGGAAATGTTGATATGAAAGAAGGGTCAGGGTTTCTGCTAGTATGGCTAATCCATTACTGTGTTATATTAATACACATATTAATCCTTTTAACATTACTCAGTAATTCTAAAGGGTCACAAATTAAACTGCCAATGTGTATTAATTAG

Network for GWHGAAZE032488

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	34	467	9.90E-90

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.154
	SRR3591707	mature leaf	2.518
	SRR3591708	Shoot apex	0.337
	SRR3591709	Stem	1.185
	SRR3591710	White floral bud	0.736
	SRR3591711	White flower	0.474
	SRR3591712	Green floral bud	0.506
	SRR3591713	Yellow flower	0.445
SRP173429	SRR8316895	Juvenile bud stage	1.247
	SRR8316896	Juvenile bud stage	2.553
	SRR8316897	Juvenile bud stage	0.139
	SRR8316894	Third green stage	0.740
	SRR8316900	Third green stage	1.583
	SRR8316901	Third green stage	2.550
	SRR8316898	Complete white stage	1.895
	SRR8316899	Complete white stage	4.810
	SRR8316903	Complete white stage	3.023
	SRR8316902	Silver flowering stage	3.276
	SRR8316904	Silver flowering stage	2.263
	SRR8316905	Silver flowering stage	1.833
	SRR8316906	Gold flowering stage	7.089
	SRR8316907	Gold flowering stage	4.021
	SRR8316908	Gold flowering stage	7.381
SRP132670	SRR6706286	Control	3.639
	SRR6706287	Light intensity 50%	2.580
	SRR6706288	Light intensity 20%	1.817
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.388
	CNS0095593	Slightly white alabastrum(diploid) 2	0.481
	CNS0095594	Slightly white alabastrum(diploid) 3	1.632
	CNS0095595	Whole white alabastrum(diploid) 2	0.483
	CNS0095596	Whole white alabastrum(diploid) 3	0.430
	CNS0095597	Whole white alabastrum(diploid) 4	1.579
	CNS0095598	Silvery flower (diploied) 1	1.580
	CNS0095599	Silvery flower (diploied) 2	1.305
	CNS0095600	Silvery flower (diploied) 3	6.367
	CNS0095601	Golden flower (diploid) 1	1.662
	CNS0095602	Golden flower (diploid) 2	2.083
	CNS0095603	Golden flower (diploid) 3	2.769
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.884
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.693
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.318
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.293
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.767
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.682
	CNS0095610	Silvery flower (tetraploid) 1	8.729
	CNS0095611	Silvery flower (tetraploid) 2	7.623
	CNS0095612	Silvery flower (tetraploid) 3	6.030
	CNS0095613	Golden flower (tetraploid) 1	3.107
	CNS0095614	Golden flower (tetraploid) 2	5.232
	CNS0095615	Golden flower (tetraploid) 3	2.426
CRA001975	CRR073297	Stem 1	0.756
	CRR073298	Stem 2	0.911
	CRR073299	Stem 3	0.567
	CRR073300	Leaf 1	1.192
	CRR073301	Leaf 2	1.061
	CRR073302	Leaf 3	0.386
	CRR073303	Juvenile bud 1	0.821
	CRR073304	Juvenile bud 2	1.546
	CRR073305	Juvenile bud 3	2.714
	CRR073306	Third green 1	2.530
	CRR073307	Third green 2	0.951
	CRR073308	Third green 3	1.873
	CRR073309	Second white 1	2.021
	CRR073310	Second white 2	1.864
	CRR073311	Second white 3	1.615
	CRR073312	Silver flowering 1	2.767
	CRR073313	Silver flowering 2	3.006
	CRR073314	Silver flowering 3	1.476
	CRR073315	Gold flowering 1	5.651
	CRR073316	Gold flowering 2	6.224
	CRR073317	Gold flowering 3	5.401
	CRR073318	Tawny withering 1	10.588
	CRR073319	Tawny withering 2	14.607
	CRR073320	Tawny withering 3	2.572