Detail information of GWHGAAZE032452


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009592852.14.0418E-131PREDICTED: nudix hydrolase 23, chloroplastic [Nicotiana tomentosiformis]
COGYP_314505.15E-57hypothetical protein Tbd_0747
Swissprottr|P93740|NUD23_ARATH3E-122Nudix hydrolase 23, chloroplastic (Precursor)
trEMBLtr|A0A067JXA4|A0A067JXA4_JATCU3E-129Uncharacterized protein {ECO:0000313|EMBL:KDP24630.1}
TAIR10AT2G42070.16E-98nudix hydrolase homolog 23

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000021gene25787972580775-
GWHAAZE00000021mRNA25787972580775-
GWHAAZE00000021exon25805122580775-
GWHAAZE00000021exon25798432579919-
GWHAAZE00000021exon25796052579740-
GWHAAZE00000021exon25793732579513-
GWHAAZE00000021exon25791822579240-
GWHAAZE00000021exon25787972578857-
GWHAAZE00000021CDS25805122580775-
GWHAAZE00000021CDS25798432579919-
GWHAAZE00000021CDS25796052579740-
GWHAAZE00000021CDS25793732579513-
GWHAAZE00000021CDS25791822579240-
GWHAAZE00000021CDS25787972578857-
Transcript Sequence

Network for GWHGAAZE032452

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14803.7Nudix_N_251845.00E-13
PF00293.29NUDIX891907.50E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18453NUDT23 Metabolic pathways map01100
Purine metabolismmap00230
Riboflavin metabolismmap00740

Gene Ontology

GO term OntologyName
GO:0016787molecular_functionhydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf17.466
SRR3591706second leaf16.471
SRR3591707mature leaf17.663
SRR3591708Shoot apex21.488
SRR3591709Stem24.777
SRR3591710White floral bud18.273
SRR3591711White flower24.779
SRR3591712Green floral bud15.506
SRR3591713Yellow flower21.532
SRP173429 SRR8316895Juvenile bud stage 12.822
SRR8316896Juvenile bud stage 15.506
SRR8316897Juvenile bud stage 8.160
SRR8316894Third green stage 8.163
SRR8316900Third green stage 16.854
SRR8316901Third green stage 17.710
SRR8316898Complete white stage 9.092
SRR8316899Complete white stage 22.835
SRR8316903Complete white stage 17.051
SRR8316902Silver flowering stage13.261
SRR8316904Silver flowering stage17.995
SRR8316905Silver flowering stage8.012
SRR8316906Gold flowering stage 25.063
SRR8316907Gold flowering stage 28.335
SRR8316908Gold flowering stage 25.084
SRP132670SRR6706286Control21.692
SRR6706287Light intensity 50%22.917
SRR6706288Light intensity 20%24.683
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.606
CNS0095593Slightly white alabastrum(diploid) 218.335
CNS0095594Slightly white alabastrum(diploid) 317.455
CNS0095595Whole white alabastrum(diploid) 215.699
CNS0095596Whole white alabastrum(diploid) 315.787
CNS0095597Whole white alabastrum(diploid) 413.186
CNS0095598Silvery flower (diploied) 120.427
CNS0095599Silvery flower (diploied) 213.504
CNS0095600Silvery flower (diploied) 320.959
CNS0095601Golden flower (diploid) 120.031
CNS0095602Golden flower (diploid) 215.596
CNS0095603Golden flower (diploid) 314.823
CNS0095604Slightly white alabastrum(tetraploid) 117.978
CNS0095605Slightly white alabastrum(tetraploid) 217.278
CNS0095606Slightly white alabastrum(tetraploid) 322.674
CNS0095607Whole white alabastrum(tetraploid) 113.547
CNS0095608Whole white alabastrum(tetraploid) 211.504
CNS0095609Whole white alabastrum(tetraploid) 314.208
CNS0095610Silvery flower (tetraploid) 121.780
CNS0095611Silvery flower (tetraploid) 220.020
CNS0095612Silvery flower (tetraploid) 319.364
CNS0095613Golden flower (tetraploid) 117.485
CNS0095614Golden flower (tetraploid) 219.207
CNS0095615Golden flower (tetraploid) 320.690
CRA001975CRR073297Stem 118.249
CRR073298Stem 218.390
CRR073299Stem 313.417
CRR073300Leaf 121.719
CRR073301Leaf 218.547
CRR073302Leaf 314.504
CRR073303Juvenile bud 119.510
CRR073304Juvenile bud 215.196
CRR073305Juvenile bud 319.519
CRR073306Third green 118.299
CRR073307Third green 220.587
CRR073308Third green 315.044
CRR073309Second white 112.522
CRR073310Second white 213.354
CRR073311Second white 311.150
CRR073312Silver flowering 110.259
CRR073313Silver flowering 28.600
CRR073314Silver flowering 38.912
CRR073315Gold flowering 114.870
CRR073316Gold flowering 216.598
CRR073317Gold flowering 313.520
CRR073318Tawny withering 113.845
CRR073319Tawny withering 214.012
CRR073320Tawny withering 314.117