Detail information of GWHGAAZE032433


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007029058.17.46686E-98C2H2 and C2HC zinc fingers superfamily protein, putative [Theobroma cacao]
Swissprottr|P93751|ZFP8_ARATH7E-45Zinc finger protein 8
trEMBLtr|A0A061EWT6|A0A061EWT6_THECC3E-98C2H2 and C2HC zinc fingers superfamily protein, putative {ECO:0000313|EMBL:EOY09560.1}
TAIR10AT2G41940.14E-35zinc finger protein 8

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000021gene22652412265972+
GWHAAZE00000021mRNA22652412265972+
GWHAAZE00000021exon22652412265972+
GWHAAZE00000021CDS22652412265972+
Transcript Sequence

Network for GWHGAAZE032433

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.898
SRR3591706second leaf21.053
SRR3591707mature leaf33.457
SRR3591708Shoot apex25.026
SRR3591709Stem1.235
SRR3591710White floral bud2.271
SRR3591711White flower1.841
SRR3591712Green floral bud1.467
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 2.897
SRR8316896Juvenile bud stage 1.150
SRR8316897Juvenile bud stage 0.132
SRR8316894Third green stage 1.809
SRR8316900Third green stage 0.783
SRR8316901Third green stage 1.839
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 3.266
SRR8316903Complete white stage 1.651
SRR8316902Silver flowering stage0.147
SRR8316904Silver flowering stage0.181
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.069
SRP132670SRR6706286Control3.133
SRR6706287Light intensity 50%2.806
SRR6706288Light intensity 20%2.816
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.563
CNS0095593Slightly white alabastrum(diploid) 22.662
CNS0095594Slightly white alabastrum(diploid) 32.235
CNS0095595Whole white alabastrum(diploid) 21.977
CNS0095596Whole white alabastrum(diploid) 31.678
CNS0095597Whole white alabastrum(diploid) 42.104
CNS0095598Silvery flower (diploied) 12.762
CNS0095599Silvery flower (diploied) 20.968
CNS0095600Silvery flower (diploied) 33.519
CNS0095601Golden flower (diploid) 13.703
CNS0095602Golden flower (diploid) 24.541
CNS0095603Golden flower (diploid) 33.862
CNS0095604Slightly white alabastrum(tetraploid) 18.376
CNS0095605Slightly white alabastrum(tetraploid) 27.006
CNS0095606Slightly white alabastrum(tetraploid) 314.823
CNS0095607Whole white alabastrum(tetraploid) 14.574
CNS0095608Whole white alabastrum(tetraploid) 21.139
CNS0095609Whole white alabastrum(tetraploid) 34.353
CNS0095610Silvery flower (tetraploid) 10.453
CNS0095611Silvery flower (tetraploid) 21.777
CNS0095612Silvery flower (tetraploid) 30.650
CNS0095613Golden flower (tetraploid) 10.121
CNS0095614Golden flower (tetraploid) 20.493
CNS0095615Golden flower (tetraploid) 30.268
CRA001975CRR073297Stem 18.148
CRR073298Stem 26.303
CRR073299Stem 311.270
CRR073300Leaf 14.240
CRR073301Leaf 26.134
CRR073302Leaf 36.562
CRR073303Juvenile bud 18.365
CRR073304Juvenile bud 21.978
CRR073305Juvenile bud 36.649
CRR073306Third green 10.753
CRR073307Third green 20.668
CRR073308Third green 31.148
CRR073309Second white 10.609
CRR073310Second white 20.053
CRR073311Second white 30.412
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.086
CRR073315Gold flowering 148.692
CRR073316Gold flowering 237.271
CRR073317Gold flowering 332.952
CRR073318Tawny withering 11.263
CRR073319Tawny withering 20.119
CRR073320Tawny withering 31.648