Detail information of GWHGAAZE032214


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002270456.15.3937E-130PREDICTED: uncharacterized protein LOC100246646 [Vitis vinifera]
COGYP_007144194.16E-15N-acetyltransferase GCN5
trEMBLtr|D7U1K2|D7U1K2_VITVI2E-130Putative uncharacterized protein {ECO:0000313|EMBL:CBI36618.3}
TAIR10AT4G28030.13E-88Acyl-CoA N-acyltransferases (NAT) superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene7285930272865119-
GWHAAZE00000009mRNA7285930272865119-
GWHAAZE00000009exon7285930272859474-
GWHAAZE00000009exon7286090472861024-
GWHAAZE00000009exon7286185172861946-
GWHAAZE00000009exon7286294372863098-
GWHAAZE00000009exon7286482072865119-
GWHAAZE00000009CDS7286482072865119-
GWHAAZE00000009CDS7286294372863098-
GWHAAZE00000009CDS7286185172861946-
GWHAAZE00000009CDS7286090472861024-
GWHAAZE00000009CDS7285930272859474-
Transcript Sequence

Network for GWHGAAZE032214

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00583.26Acetyltransf_11582499.10E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGNAT

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008080molecular_functionN-acetyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf24.402
SRR3591706second leaf63.528
SRR3591707mature leaf82.075
SRR3591708Shoot apex28.424
SRR3591709Stem12.510
SRR3591710White floral bud25.690
SRR3591711White flower14.431
SRR3591712Green floral bud28.863
SRR3591713Yellow flower16.032
SRP173429 SRR8316895Juvenile bud stage 10.627
SRR8316896Juvenile bud stage 15.581
SRR8316897Juvenile bud stage 7.127
SRR8316894Third green stage 6.988
SRR8316900Third green stage 23.209
SRR8316901Third green stage 24.072
SRR8316898Complete white stage 16.437
SRR8316899Complete white stage 35.106
SRR8316903Complete white stage 18.959
SRR8316902Silver flowering stage11.819
SRR8316904Silver flowering stage15.670
SRR8316905Silver flowering stage9.867
SRR8316906Gold flowering stage 20.138
SRR8316907Gold flowering stage 22.650
SRR8316908Gold flowering stage 14.836
SRP132670SRR6706286Control12.224
SRR6706287Light intensity 50%15.720
SRR6706288Light intensity 20%17.517
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.597
CNS0095593Slightly white alabastrum(diploid) 211.615
CNS0095594Slightly white alabastrum(diploid) 311.105
CNS0095595Whole white alabastrum(diploid) 215.185
CNS0095596Whole white alabastrum(diploid) 317.982
CNS0095597Whole white alabastrum(diploid) 414.196
CNS0095598Silvery flower (diploied) 114.356
CNS0095599Silvery flower (diploied) 215.379
CNS0095600Silvery flower (diploied) 318.317
CNS0095601Golden flower (diploid) 110.939
CNS0095602Golden flower (diploid) 216.703
CNS0095603Golden flower (diploid) 316.384
CNS0095604Slightly white alabastrum(tetraploid) 115.844
CNS0095605Slightly white alabastrum(tetraploid) 214.262
CNS0095606Slightly white alabastrum(tetraploid) 329.421
CNS0095607Whole white alabastrum(tetraploid) 18.921
CNS0095608Whole white alabastrum(tetraploid) 214.514
CNS0095609Whole white alabastrum(tetraploid) 328.634
CNS0095610Silvery flower (tetraploid) 130.916
CNS0095611Silvery flower (tetraploid) 233.741
CNS0095612Silvery flower (tetraploid) 329.262
CNS0095613Golden flower (tetraploid) 121.361
CNS0095614Golden flower (tetraploid) 221.091
CNS0095615Golden flower (tetraploid) 330.923
CRA001975CRR073297Stem 120.626
CRR073298Stem 215.136
CRR073299Stem 314.849
CRR073300Leaf 122.836
CRR073301Leaf 221.764
CRR073302Leaf 318.695
CRR073303Juvenile bud 118.875
CRR073304Juvenile bud 223.581
CRR073305Juvenile bud 313.177
CRR073306Third green 131.229
CRR073307Third green 224.793
CRR073308Third green 321.260
CRR073309Second white 116.215
CRR073310Second white 219.158
CRR073311Second white 314.625
CRR073312Silver flowering 17.703
CRR073313Silver flowering 29.837
CRR073314Silver flowering 35.481
CRR073315Gold flowering 158.662
CRR073316Gold flowering 269.873
CRR073317Gold flowering 356.626
CRR073318Tawny withering 17.424
CRR073319Tawny withering 26.307
CRR073320Tawny withering 37.670