Detail information of GWHGAAZE031962


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010660086.10PREDICTED: glutathione synthetase, chloroplastic isoform X1 [Vitis vinifera]
Swissprottr|O22494|GSHB_SOLLC0Glutathione synthetase, chloroplastic (Precursor)
trEMBLtr|A0A067E163|A0A067E163_CITSI0Glutathione synthetase {ECO:0000256|PIRNR:PIRNR001558}
TAIR10AT5G27380.10glutathione synthetase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6810178368111719-
GWHAAZE00000009mRNA6810178368111719-
GWHAAZE00000009exon6811165468111719-
GWHAAZE00000009exon6810975468109923-
GWHAAZE00000009exon6810740268107477-
GWHAAZE00000009exon6810658268106712-
GWHAAZE00000009exon6810548168105607-
GWHAAZE00000009exon6810459568104686-
GWHAAZE00000009exon6810442768104496-
GWHAAZE00000009exon6810395968104080-
GWHAAZE00000009exon6810333368103472-
GWHAAZE00000009exon6810246168102653-
GWHAAZE00000009exon6810178368101906-
GWHAAZE00000009CDS6811165468111719-
GWHAAZE00000009CDS6810975468109923-
GWHAAZE00000009CDS6810740268107477-
GWHAAZE00000009CDS6810658268106712-
GWHAAZE00000009CDS6810548168105607-
GWHAAZE00000009CDS6810459568104686-
GWHAAZE00000009CDS6810442768104496-
GWHAAZE00000009CDS6810395968104080-
GWHAAZE00000009CDS6810333368103472-
GWHAAZE00000009CDS6810246168102653-
GWHAAZE00000009CDS6810178368101906-
Transcript Sequence

Network for GWHGAAZE031962

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03917.18GSH_synth_ATP24353.80E-138
PF03199.16GSH_synthase1842686.20E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K21456GSS Metabolic pathways map01100
Cysteine and methionine metabolismmap00270
Glutathione metabolismmap00480
Ferroptosismap04216

Gene Ontology

GO term OntologyName
GO:0006750biological_processglutathione biosynthetic process
GO:0004363molecular_functionglutathione synthase activity
GO:0005524molecular_functionATP binding
GO:0016874molecular_functionligase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf23.197
SRR3591706second leaf18.007
SRR3591707mature leaf14.760
SRR3591708Shoot apex25.807
SRR3591709Stem20.734
SRR3591710White floral bud18.984
SRR3591711White flower22.714
SRR3591712Green floral bud19.142
SRR3591713Yellow flower22.223
SRP173429 SRR8316895Juvenile bud stage 22.185
SRR8316896Juvenile bud stage 31.060
SRR8316897Juvenile bud stage 17.475
SRR8316894Third green stage 11.597
SRR8316900Third green stage 29.157
SRR8316901Third green stage 26.229
SRR8316898Complete white stage 11.093
SRR8316899Complete white stage 39.963
SRR8316903Complete white stage 18.168
SRR8316902Silver flowering stage11.472
SRR8316904Silver flowering stage17.345
SRR8316905Silver flowering stage7.942
SRR8316906Gold flowering stage 27.439
SRR8316907Gold flowering stage 22.492
SRR8316908Gold flowering stage 28.353
SRP132670SRR6706286Control22.488
SRR6706287Light intensity 50%18.585
SRR6706288Light intensity 20%18.560
CNP0000432CNS0095592Slightly white alabastrum(diploid) 127.851
CNS0095593Slightly white alabastrum(diploid) 224.035
CNS0095594Slightly white alabastrum(diploid) 327.596
CNS0095595Whole white alabastrum(diploid) 226.163
CNS0095596Whole white alabastrum(diploid) 326.151
CNS0095597Whole white alabastrum(diploid) 426.647
CNS0095598Silvery flower (diploied) 122.747
CNS0095599Silvery flower (diploied) 217.170
CNS0095600Silvery flower (diploied) 325.847
CNS0095601Golden flower (diploid) 120.750
CNS0095602Golden flower (diploid) 223.394
CNS0095603Golden flower (diploid) 326.244
CNS0095604Slightly white alabastrum(tetraploid) 126.241
CNS0095605Slightly white alabastrum(tetraploid) 220.990
CNS0095606Slightly white alabastrum(tetraploid) 328.469
CNS0095607Whole white alabastrum(tetraploid) 116.652
CNS0095608Whole white alabastrum(tetraploid) 211.413
CNS0095609Whole white alabastrum(tetraploid) 323.566
CNS0095610Silvery flower (tetraploid) 128.526
CNS0095611Silvery flower (tetraploid) 230.215
CNS0095612Silvery flower (tetraploid) 321.986
CNS0095613Golden flower (tetraploid) 119.623
CNS0095614Golden flower (tetraploid) 227.371
CNS0095615Golden flower (tetraploid) 333.746
CRA001975CRR073297Stem 126.979
CRR073298Stem 222.506
CRR073299Stem 317.751
CRR073300Leaf 123.667
CRR073301Leaf 223.246
CRR073302Leaf 318.354
CRR073303Juvenile bud 119.863
CRR073304Juvenile bud 210.520
CRR073305Juvenile bud 319.711
CRR073306Third green 17.204
CRR073307Third green 27.445
CRR073308Third green 38.250
CRR073309Second white 15.067
CRR073310Second white 27.048
CRR073311Second white 36.527
CRR073312Silver flowering 15.487
CRR073313Silver flowering 25.991
CRR073314Silver flowering 35.496
CRR073315Gold flowering 19.938
CRR073316Gold flowering 212.033
CRR073317Gold flowering 39.670
CRR073318Tawny withering 112.559
CRR073319Tawny withering 28.736
CRR073320Tawny withering 39.244