Detail information of GWHGAAZE031843


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007148925.12.1383E-121hypothetical protein PHAVU_005G025700g [Phaseolus vulgaris]
Swissprottr|Q9LJG8|ASIL2_ARATH2E-17Trihelix transcription factor ASIL2 {ECO:0000305}
trEMBLtr|V7BSI0|V7BSI0_PHAVU8E-122Uncharacterized protein {ECO:0000313|EMBL:ESW20919.1}
TAIR10AT3G54390.14E-66sequence-specific DNA binding transcription factors

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6579987465802092+
GWHAAZE00000009mRNA6579987465802092+
GWHAAZE00000009exon6579987465800395+
GWHAAZE00000009exon6580170965802092+
GWHAAZE00000009CDS6579987465800395+
GWHAAZE00000009CDS6580170965802092+
Transcript Sequence

Network for GWHGAAZE031843

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13837.7Myb_DNA-bind_4191061.10E-18
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.652
SRR3591706second leaf2.014
SRR3591707mature leaf2.820
SRR3591708Shoot apex5.242
SRR3591709Stem10.815
SRR3591710White floral bud3.360
SRR3591711White flower3.534
SRR3591712Green floral bud4.014
SRR3591713Yellow flower0.329
SRP173429 SRR8316895Juvenile bud stage 3.641
SRR8316896Juvenile bud stage 2.743
SRR8316897Juvenile bud stage 0.504
SRR8316894Third green stage 1.407
SRR8316900Third green stage 3.500
SRR8316901Third green stage 2.824
SRR8316898Complete white stage 1.088
SRR8316899Complete white stage 5.564
SRR8316903Complete white stage 1.434
SRR8316902Silver flowering stage0.912
SRR8316904Silver flowering stage0.486
SRR8316905Silver flowering stage0.117
SRR8316906Gold flowering stage 0.250
SRR8316907Gold flowering stage 0.725
SRR8316908Gold flowering stage 0.530
SRP132670SRR6706286Control2.386
SRR6706287Light intensity 50%2.912
SRR6706288Light intensity 20%2.030
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.382
CNS0095593Slightly white alabastrum(diploid) 23.116
CNS0095594Slightly white alabastrum(diploid) 34.204
CNS0095595Whole white alabastrum(diploid) 23.467
CNS0095596Whole white alabastrum(diploid) 32.402
CNS0095597Whole white alabastrum(diploid) 41.950
CNS0095598Silvery flower (diploied) 13.814
CNS0095599Silvery flower (diploied) 24.063
CNS0095600Silvery flower (diploied) 31.197
CNS0095601Golden flower (diploid) 13.434
CNS0095602Golden flower (diploid) 21.069
CNS0095603Golden flower (diploid) 32.113
CNS0095604Slightly white alabastrum(tetraploid) 12.486
CNS0095605Slightly white alabastrum(tetraploid) 22.182
CNS0095606Slightly white alabastrum(tetraploid) 35.413
CNS0095607Whole white alabastrum(tetraploid) 12.206
CNS0095608Whole white alabastrum(tetraploid) 21.870
CNS0095609Whole white alabastrum(tetraploid) 31.293
CNS0095610Silvery flower (tetraploid) 11.163
CNS0095611Silvery flower (tetraploid) 21.962
CNS0095612Silvery flower (tetraploid) 31.173
CNS0095613Golden flower (tetraploid) 11.127
CNS0095614Golden flower (tetraploid) 20.423
CNS0095615Golden flower (tetraploid) 30.495
CRA001975CRR073297Stem 14.949
CRR073298Stem 22.727
CRR073299Stem 37.168
CRR073300Leaf 13.139
CRR073301Leaf 23.283
CRR073302Leaf 33.893
CRR073303Juvenile bud 13.892
CRR073304Juvenile bud 23.545
CRR073305Juvenile bud 34.662
CRR073306Third green 10.482
CRR073307Third green 20.498
CRR073308Third green 31.652
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.056
CRR073315Gold flowering 12.968
CRR073316Gold flowering 22.054
CRR073317Gold flowering 32.534
CRR073318Tawny withering 18.803
CRR073319Tawny withering 27.930
CRR073320Tawny withering 38.487