Detail information of GWHGAAZE031543


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007218864.10hypothetical protein PRUPE_ppa002955mg [Prunus persica]
COGYP_002249289.13E-77glycogen synthase
Swissprottr|O82627|SSG1_ANTMA0Granule-bound starch synthase 1, chloroplastic/amyloplastic (Precursor)
trEMBLtr|H6VVJ3|H6VVJ3_PRUPE0Starch synthase, chloroplastic/amyloplastic {ECO:0000256|RuleBase:RU361232}
TAIR10AT1G32900.10UDP-Glycosyltransferase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6073046160733960-
GWHAAZE00000009mRNA6073046160733960-
GWHAAZE00000009exon6073368360733960-
GWHAAZE00000009exon6073349260733590-
GWHAAZE00000009exon6073329260733381-
GWHAAZE00000009exon6073311060733173-
GWHAAZE00000009exon6073292160733021-
GWHAAZE00000009exon6073268860732797-
GWHAAZE00000009exon6073205860732301-
GWHAAZE00000009exon6073178760731963-
GWHAAZE00000009exon6073142160731612-
GWHAAZE00000009exon6073113660731222-
GWHAAZE00000009exon6073090860731036-
GWHAAZE00000009exon6073046160730788-
GWHAAZE00000009five_prime_UTR6073374660733960-
GWHAAZE00000009CDS6073368360733745-
GWHAAZE00000009CDS6073349260733590-
GWHAAZE00000009CDS6073329260733381-
GWHAAZE00000009CDS6073311060733173-
GWHAAZE00000009CDS6073292160733021-
GWHAAZE00000009CDS6073268860732797-
GWHAAZE00000009CDS6073205860732301-
GWHAAZE00000009CDS6073178760731963-
GWHAAZE00000009CDS6073142160731612-
GWHAAZE00000009CDS6073113660731222-
GWHAAZE00000009CDS6073090860731036-
GWHAAZE00000009CDS6073067260730788-
GWHAAZE00000009three_prime_UTR6073046160730671-
Transcript Sequence

Network for GWHGAAZE031543

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08323.12Glyco_transf_542266.10E-54
PF00534.21Glycos_transf_12804011.00E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13679WAXY Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName
GO:0004373molecular_functionglycogen (starch) synthase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf29.620
SRR3591706second leaf316.492
SRR3591707mature leaf219.364
SRR3591708Shoot apex93.531
SRR3591709Stem25.380
SRR3591710White floral bud12.741
SRR3591711White flower6.876
SRR3591712Green floral bud20.190
SRR3591713Yellow flower2.760
SRP173429 SRR8316895Juvenile bud stage 34.867
SRR8316896Juvenile bud stage 30.806
SRR8316897Juvenile bud stage 18.218
SRR8316894Third green stage 16.902
SRR8316900Third green stage 24.613
SRR8316901Third green stage 32.417
SRR8316898Complete white stage 8.532
SRR8316899Complete white stage 36.949
SRR8316903Complete white stage 14.006
SRR8316902Silver flowering stage5.532
SRR8316904Silver flowering stage9.116
SRR8316905Silver flowering stage5.146
SRR8316906Gold flowering stage 8.453
SRR8316907Gold flowering stage 6.945
SRR8316908Gold flowering stage 9.499
SRP132670SRR6706286Control19.122
SRR6706287Light intensity 50%23.991
SRR6706288Light intensity 20%26.721
CNP0000432CNS0095592Slightly white alabastrum(diploid) 131.795
CNS0095593Slightly white alabastrum(diploid) 227.227
CNS0095594Slightly white alabastrum(diploid) 328.346
CNS0095595Whole white alabastrum(diploid) 222.155
CNS0095596Whole white alabastrum(diploid) 321.236
CNS0095597Whole white alabastrum(diploid) 420.272
CNS0095598Silvery flower (diploied) 125.136
CNS0095599Silvery flower (diploied) 226.815
CNS0095600Silvery flower (diploied) 38.759
CNS0095601Golden flower (diploid) 112.852
CNS0095602Golden flower (diploid) 26.189
CNS0095603Golden flower (diploid) 37.518
CNS0095604Slightly white alabastrum(tetraploid) 137.821
CNS0095605Slightly white alabastrum(tetraploid) 232.934
CNS0095606Slightly white alabastrum(tetraploid) 357.307
CNS0095607Whole white alabastrum(tetraploid) 122.794
CNS0095608Whole white alabastrum(tetraploid) 218.270
CNS0095609Whole white alabastrum(tetraploid) 331.533
CNS0095610Silvery flower (tetraploid) 119.900
CNS0095611Silvery flower (tetraploid) 215.966
CNS0095612Silvery flower (tetraploid) 35.017
CNS0095613Golden flower (tetraploid) 14.856
CNS0095614Golden flower (tetraploid) 28.341
CNS0095615Golden flower (tetraploid) 33.154
CRA001975CRR073297Stem 110.561
CRR073298Stem 28.543
CRR073299Stem 36.838
CRR073300Leaf 17.372
CRR073301Leaf 28.076
CRR073302Leaf 35.418
CRR073303Juvenile bud 18.049
CRR073304Juvenile bud 23.733
CRR073305Juvenile bud 36.550
CRR073306Third green 12.081
CRR073307Third green 21.520
CRR073308Third green 32.152
CRR073309Second white 11.706
CRR073310Second white 20.855
CRR073311Second white 31.048
CRR073312Silver flowering 10.416
CRR073313Silver flowering 20.468
CRR073314Silver flowering 30.669
CRR073315Gold flowering 128.949
CRR073316Gold flowering 227.370
CRR073317Gold flowering 321.315
CRR073318Tawny withering 12.030
CRR073319Tawny withering 21.520
CRR073320Tawny withering 32.123