Detail information of GWHGAAZE031202


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011017312.10PREDICTED: NAD-dependent malic enzyme 62 kDa isoform, mitochondrial [Populus euphratica]
COGYP_005607828.13E-98malic enzyme
Swissprottr|P37221|MAOM_SOLTU0NAD-dependent malic enzyme 62 kDa isoform, mitochondrial (Precursor)
trEMBLtr|B9GP43|B9GP43_POPTR0Malic enzyme {ECO:0000256|RuleBase:RU003426}
TAIR10AT2G13560.11E-172NAD-dependent malic enzyme 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5491634554934258-
GWHAAZE00000009mRNA5491634554934258-
GWHAAZE00000009exon5491634554916419-
GWHAAZE00000009exon5491690654917020-
GWHAAZE00000009exon5491710654917168-
GWHAAZE00000009exon5491779554917866-
GWHAAZE00000009exon5491796854918022-
GWHAAZE00000009exon5491832554918411-
GWHAAZE00000009exon5491848754918559-
GWHAAZE00000009exon5491866354918728-
GWHAAZE00000009exon5492060054920713-
GWHAAZE00000009exon5492340854923519-
GWHAAZE00000009exon5492372754923833-
GWHAAZE00000009exon5492460454924687-
GWHAAZE00000009exon5492532454925427-
GWHAAZE00000009exon5492663354926693-
GWHAAZE00000009exon5492759654927754-
GWHAAZE00000009exon5492886354929105-
GWHAAZE00000009exon5492955154929784-
GWHAAZE00000009exon5493244054932558-
GWHAAZE00000009exon5493281654932912-
GWHAAZE00000009exon5493409154934258-
GWHAAZE00000009CDS5493409154934258-
GWHAAZE00000009CDS5493281654932912-
GWHAAZE00000009CDS5493244054932558-
GWHAAZE00000009CDS5492955154929784-
GWHAAZE00000009CDS5492886354929105-
GWHAAZE00000009CDS5492759654927754-
GWHAAZE00000009CDS5492663354926693-
GWHAAZE00000009CDS5492532454925427-
GWHAAZE00000009CDS5492460454924687-
GWHAAZE00000009CDS5492372754923833-
GWHAAZE00000009CDS5492340854923519-
GWHAAZE00000009CDS5492060054920713-
GWHAAZE00000009CDS5491866354918728-
GWHAAZE00000009CDS5491848754918559-
GWHAAZE00000009CDS5491832554918411-
GWHAAZE00000009CDS5491796854918022-
GWHAAZE00000009CDS5491779554917866-
GWHAAZE00000009CDS5491710654917168-
GWHAAZE00000009CDS5491690654917020-
GWHAAZE00000009CDS5491634554916419-
Transcript Sequence

Network for GWHGAAZE031202

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00390.20malic1191852.00E-17
PF00390.20malic2834122.20E-44
PF03949.16Malic_M4226903.20E-88
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00028E1.1.1.39 Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Pyruvate metabolismmap00620
Carbon fixation in photosynthetic organismsmap00710

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0004470molecular_functionmalic enzyme activity
GO:0004471molecular_functionmalate dehydrogenase (decarboxylating) (NAD+) activity
GO:0051287molecular_functionNAD binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.403
SRR3591706second leaf0.773
SRR3591707mature leaf0.934
SRR3591708Shoot apex1.988
SRR3591709Stem0.373
SRR3591710White floral bud3.222
SRR3591711White flower2.943
SRR3591712Green floral bud10.462
SRR3591713Yellow flower2.106
SRP173429 SRR8316895Juvenile bud stage 5.808
SRR8316896Juvenile bud stage 12.761
SRR8316897Juvenile bud stage 5.134
SRR8316894Third green stage 5.919
SRR8316900Third green stage 11.704
SRR8316901Third green stage 15.975
SRR8316898Complete white stage 0.813
SRR8316899Complete white stage 1.381
SRR8316903Complete white stage 1.170
SRR8316902Silver flowering stage1.686
SRR8316904Silver flowering stage2.209
SRR8316905Silver flowering stage0.953
SRR8316906Gold flowering stage 4.224
SRR8316907Gold flowering stage 4.128
SRR8316908Gold flowering stage 5.292
SRP132670SRR6706286Control7.283
SRR6706287Light intensity 50%7.623
SRR6706288Light intensity 20%7.255
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.716
CNS0095593Slightly white alabastrum(diploid) 26.381
CNS0095594Slightly white alabastrum(diploid) 310.500
CNS0095595Whole white alabastrum(diploid) 26.452
CNS0095596Whole white alabastrum(diploid) 38.639
CNS0095597Whole white alabastrum(diploid) 46.454
CNS0095598Silvery flower (diploied) 11.829
CNS0095599Silvery flower (diploied) 22.155
CNS0095600Silvery flower (diploied) 32.262
CNS0095601Golden flower (diploid) 11.576
CNS0095602Golden flower (diploid) 21.598
CNS0095603Golden flower (diploid) 31.860
CNS0095604Slightly white alabastrum(tetraploid) 116.662
CNS0095605Slightly white alabastrum(tetraploid) 214.458
CNS0095606Slightly white alabastrum(tetraploid) 33.231
CNS0095607Whole white alabastrum(tetraploid) 116.135
CNS0095608Whole white alabastrum(tetraploid) 215.609
CNS0095609Whole white alabastrum(tetraploid) 318.281
CNS0095610Silvery flower (tetraploid) 15.798
CNS0095611Silvery flower (tetraploid) 25.586
CNS0095612Silvery flower (tetraploid) 311.250
CNS0095613Golden flower (tetraploid) 13.869
CNS0095614Golden flower (tetraploid) 23.744
CNS0095615Golden flower (tetraploid) 33.466
CRA001975CRR073297Stem 16.763
CRR073298Stem 26.785
CRR073299Stem 35.013
CRR073300Leaf 17.843
CRR073301Leaf 29.789
CRR073302Leaf 37.845
CRR073303Juvenile bud 12.759
CRR073304Juvenile bud 22.796
CRR073305Juvenile bud 31.337
CRR073306Third green 14.347
CRR073307Third green 23.510
CRR073308Third green 34.546
CRR073309Second white 11.964
CRR073310Second white 22.380
CRR073311Second white 32.158
CRR073312Silver flowering 12.301
CRR073313Silver flowering 22.059
CRR073314Silver flowering 31.127
CRR073315Gold flowering 11.696
CRR073316Gold flowering 23.577
CRR073317Gold flowering 30.990
CRR073318Tawny withering 10.270
CRR073319Tawny withering 20.682
CRR073320Tawny withering 30.456