Detail information of GWHGAAZE030930


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrNP_001268086.12.67817E-64auxin-induced protein 22A-like [Vitis vinifera]
Swissprottr|P13088|AUX22_SOYBN1E-63Auxin-induced protein AUX22
trEMBLtr|E5L881|E5L881_VITVI1E-64Auxin-responsive protein {ECO:0000256|RuleBase:RU004549}
TAIR10AT3G15540.12E-37indole-3-acetic acid inducible 19

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5054900050550078-
GWHAAZE00000009mRNA5054900050550078-
GWHAAZE00000009exon5054900050549097-
GWHAAZE00000009exon5054968550550078-
GWHAAZE00000009CDS5054968550550078-
GWHAAZE00000009CDS5054900050549097-
Transcript Sequence

Network for GWHGAAZE030930

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02309.17AUX_IAA331633.10E-32
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAUX/IAA

KEGG pathway

KO Enzyme pathway mapID
K14484IAA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf130.910
SRR3591706second leaf50.490
SRR3591707mature leaf16.059
SRR3591708Shoot apex31.546
SRR3591709Stem54.494
SRR3591710White floral bud45.297
SRR3591711White flower33.230
SRR3591712Green floral bud60.516
SRR3591713Yellow flower8.008
SRP173429 SRR8316895Juvenile bud stage 42.350
SRR8316896Juvenile bud stage 56.533
SRR8316897Juvenile bud stage 22.517
SRR8316894Third green stage 41.142
SRR8316900Third green stage 205.957
SRR8316901Third green stage 210.141
SRR8316898Complete white stage 60.711
SRR8316899Complete white stage 323.189
SRR8316903Complete white stage 94.826
SRR8316902Silver flowering stage48.835
SRR8316904Silver flowering stage61.396
SRR8316905Silver flowering stage39.313
SRR8316906Gold flowering stage 83.354
SRR8316907Gold flowering stage 32.195
SRR8316908Gold flowering stage 33.233
SRP132670SRR6706286Control188.998
SRR6706287Light intensity 50%223.484
SRR6706288Light intensity 20%283.081
CNP0000432CNS0095592Slightly white alabastrum(diploid) 148.046
CNS0095593Slightly white alabastrum(diploid) 296.718
CNS0095594Slightly white alabastrum(diploid) 345.104
CNS0095595Whole white alabastrum(diploid) 285.815
CNS0095596Whole white alabastrum(diploid) 366.314
CNS0095597Whole white alabastrum(diploid) 483.811
CNS0095598Silvery flower (diploied) 14.755
CNS0095599Silvery flower (diploied) 27.674
CNS0095600Silvery flower (diploied) 316.190
CNS0095601Golden flower (diploid) 14.394
CNS0095602Golden flower (diploid) 23.373
CNS0095603Golden flower (diploid) 33.351
CNS0095604Slightly white alabastrum(tetraploid) 161.681
CNS0095605Slightly white alabastrum(tetraploid) 237.428
CNS0095606Slightly white alabastrum(tetraploid) 3129.692
CNS0095607Whole white alabastrum(tetraploid) 135.254
CNS0095608Whole white alabastrum(tetraploid) 264.198
CNS0095609Whole white alabastrum(tetraploid) 3130.371
CNS0095610Silvery flower (tetraploid) 18.241
CNS0095611Silvery flower (tetraploid) 27.341
CNS0095612Silvery flower (tetraploid) 38.761
CNS0095613Golden flower (tetraploid) 11.899
CNS0095614Golden flower (tetraploid) 24.026
CNS0095615Golden flower (tetraploid) 31.794
CRA001975CRR073297Stem 153.258
CRR073298Stem 263.763
CRR073299Stem 349.507
CRR073300Leaf 1233.076
CRR073301Leaf 2212.409
CRR073302Leaf 3284.129
CRR073303Juvenile bud 1302.178
CRR073304Juvenile bud 2294.105
CRR073305Juvenile bud 3211.745
CRR073306Third green 1286.777
CRR073307Third green 2313.992
CRR073308Third green 3291.135
CRR073309Second white 116.927
CRR073310Second white 215.570
CRR073311Second white 33.490
CRR073312Silver flowering 12.625
CRR073313Silver flowering 20.737
CRR073314Silver flowering 31.313
CRR073315Gold flowering 135.306
CRR073316Gold flowering 228.870
CRR073317Gold flowering 328.778
CRR073318Tawny withering 114.183
CRR073319Tawny withering 222.163
CRR073320Tawny withering 316.525