Gene detail

Detail information of GWHGAAZE030677

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007210336.1	0	hypothetical protein PRUPE_ppa002021mg [Prunus persica]
COG	YP_002429969.1	0.000000002	diacylglycerol kinase catalytic subunit
Swissprot	tr\|Q39017\|DGK1_ARATH	0	Diacylglycerol kinase 1
trEMBL	tr\|M5WXK0\|M5WXK0_PRUPE	0	Diacylglycerol kinase {ECO:0000256\|RuleBase:RU361128}
TAIR10	AT5G07920.1	0	diacylglycerol kinase1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	47022021	47036121	-
GWHAAZE00000009	mRNA	47022021	47036121	-
GWHAAZE00000009	exon	47036045	47036121	-
GWHAAZE00000009	exon	47027519	47028599	-
GWHAAZE00000009	exon	47026761	47027127	-
GWHAAZE00000009	exon	47026120	47026196	-
GWHAAZE00000009	exon	47024153	47024272	-
GWHAAZE00000009	exon	47023618	47023782	-
GWHAAZE00000009	exon	47022021	47022206	-
GWHAAZE00000009	CDS	47036045	47036121	-
GWHAAZE00000009	CDS	47027519	47028599	-
GWHAAZE00000009	CDS	47026761	47027127	-
GWHAAZE00000009	CDS	47026120	47026196	-
GWHAAZE00000009	CDS	47024153	47024272	-
GWHAAZE00000009	CDS	47023618	47023782	-
GWHAAZE00000009	CDS	47022021	47022206	-

Transcript Sequence
>GWHTAAZE030711 ATGGACGGAGATGAGAAGGGAAAGGAGAGGAGAGGAGCAGAGTTAAAAGGTAAGGATTTAGGGCACAAGCACAATAAGCCTTATTGGAATCGTGACTATAGCCTACACTGCCTTCAATGGAGAAGAAACATCAATCTAAGTTGGATGAAAGCCATTGCCAGGTCAAAGAAGAACCCCAAAGTGAGGAACAAGGTTCCTGTAGCTCCTCATACTTGGGTTTTGGAATCTGTGTCTCGTGGGAAAAGCTTAAAATGCTGTGTATGCTTAAAGTCCATGTCACCTTCTCAAGCTCTTGGACCGATGGTAGCTTCAGACAGTTTTATCCACCGCTGTAGCATATGTGGTGCTGCGGCGCACCTTGGCTGCTCGTCGAATGCTCACAAAGATTGCAAGTGCGTCGCTATGATTGGGTATGAGCATATGATGCATCAATGGGCGGTCCGGTGGACGGAGGTTGCAGATCAAGCCGATGAAACTTCCTTCTGTAGCTATTGCGAAGAGCCTTGTAGTGGTTCTTTCCTTGGTGGATCCCCTATATGGTGTTGCTTATGGTGTCAGCGGCTGGTACATGTAGACTGCCACAGTAGCATGTATAATGAAACAGGTGATATTTGTGATTTGGGCACATTTAAAAGGCTGATTTTATCTCCAATTTATGTTAGGGAGCTAAACCAGTCTTCACCAAGTGGATTTTTGAGTTCCATCTCTCATGGTGCCAATGAGATTGCATCTTCTGTACGTGCTAGTATCAGGAGTCAAAGTAAAAAGCACAAGCAGGGAAATGAAATCTCTGCAGACGCGGGTAATACCTGTAGTATTGGTTACTTATCCACAGAAAGCACAGCTGACGCTAATCAAATAATTAATGGTACTCATAAAATGGAGGAAAGCTGTAATGGTAGTGTGAACATGGAGGGTCAGGACCAGCGACAAGATGGTGATACAGTTAAAAAGTTAGATTCAAAGCTGAGTTTTAAAAGAAGCTCATCTGTCAATCACAAGGATGAGTTGCAGATAGTAGGGATGAAGCAGAAATTTGAGTTGACTGATTTGCCTCCAGATGCAAGACCTCTTTTAGTTTTCATTAACAAGAAGAGTGGGGCTCAGCGAGGGGATTCACTTAGGCTACGTTTGAACATTCTCTTGAATCCCGTTCAGGTCTTCGAGCTGAGCTCAACACAGGGACCAGAGGTTGGTCTGTATTTATTTAGGAAGGTGCCACATTTCAGAATCCTTGTATGCGGAGGGGACGGAACTGTTGGCTGGGTTTTGAATGCGATAGACAAGCAAAATTTTGTTTCTCCGCCTCCAGTAGCTATCCTTCCTGCTGGAACGGGAAATGACTTAGCTCGAGTTTTGTCTTGGGGAGGCGGTTTGGGCTCTGTGGAGAGACAGGGAGGCCTATACACAGTTCTGCACCACATAGAACATGCTGCAGTAACCATCCTTGATCGTTGGAAGATTTCAATTGTAAACCAACAAGGAAAGCAAATCCAATCCCCAAAATTCATGAACAACTACCTTGGGGTTGGATGTGATGCAAAGGTTGCTCTGGAAATTCACAACTTGAGGGAAGAGAATCCAGAGAAATTCTATAACCAGTTTATGAATAAAGTTCTTTACGCAAGGGAAGGTGCCAAGAGTATCATGGATAGGACATTTGTAGATTTTCCTTGGCAAGTTCGAGTGGAGGTTGATGGTGTTGAAGTAGAGGTCCCCGAGGATGCTGAAGGTGTGCTCGTTGCTAATATTGGAAGTTATATGGGGGGAGTAGATCTGTGGCAAAATGAGGATGAAACTTATGATAATTTTGATCCCCAATCTATGCATGATAAGATATTGGAGGTTGTGAGCATATCTGGGACATGGCATCTTGGCAAGCTTCAGTTGGGTTTTGGCTTTTATGCGTTCCTCTTTGAAAAGGCATTCATGCTGAAGAGAGCATCAGAGGAACCACTGGGACATGCAGCGGCTATAATAGCGGACGTGCTGGAGAATGCTGAAACGAGTCATGTGATTAATGCATCACAGAAGAGAGCTCTTCTTCAAGAAATGGCACTCAAGCTCTCCTAG

Network for GWHGAAZE030677

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00130.23	C1_1	143	203	2.30E-12
PF00781.25	DAGK_cat	357	457	1.10E-26
PF00609.20	DAGK_acc	503	632	2.10E-43

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00901	dgkA, DGK	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Glycerolipid metabolism	map00561
		Glycerophospholipid metabolism	map00564
		Phosphatidylinositol signaling system	map04070
		Phospholipase D signaling pathway	map04072
		Axon regeneration	map04361

Gene Ontology

GO term	Ontology	Name
GO:0035556	biological_process	intracellular signal transduction
GO:0007205	biological_process	protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0004143	molecular_function	diacylglycerol kinase activity
GO:0016301	molecular_function	kinase activity
GO:0003951	molecular_function	NAD+ kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	50.802
	SRR3591706	second leaf	20.419
	SRR3591707	mature leaf	11.572
	SRR3591708	Shoot apex	34.480
	SRR3591709	Stem	51.025
	SRR3591710	White floral bud	26.728
	SRR3591711	White flower	31.742
	SRR3591712	Green floral bud	32.645
	SRR3591713	Yellow flower	16.738
SRP173429	SRR8316895	Juvenile bud stage	20.481
	SRR8316896	Juvenile bud stage	30.969
	SRR8316897	Juvenile bud stage	13.683
	SRR8316894	Third green stage	12.580
	SRR8316900	Third green stage	32.804
	SRR8316901	Third green stage	28.979
	SRR8316898	Complete white stage	10.342
	SRR8316899	Complete white stage	40.630
	SRR8316903	Complete white stage	20.171
	SRR8316902	Silver flowering stage	9.020
	SRR8316904	Silver flowering stage	14.046
	SRR8316905	Silver flowering stage	5.828
	SRR8316906	Gold flowering stage	23.053
	SRR8316907	Gold flowering stage	21.449
	SRR8316908	Gold flowering stage	23.140
SRP132670	SRR6706286	Control	22.889
	SRR6706287	Light intensity 50%	23.260
	SRR6706288	Light intensity 20%	25.488
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	20.301
	CNS0095593	Slightly white alabastrum(diploid) 2	20.079
	CNS0095594	Slightly white alabastrum(diploid) 3	18.402
	CNS0095595	Whole white alabastrum(diploid) 2	20.138
	CNS0095596	Whole white alabastrum(diploid) 3	16.726
	CNS0095597	Whole white alabastrum(diploid) 4	19.527
	CNS0095598	Silvery flower (diploied) 1	20.378
	CNS0095599	Silvery flower (diploied) 2	16.219
	CNS0095600	Silvery flower (diploied) 3	24.858
	CNS0095601	Golden flower (diploid) 1	15.402
	CNS0095602	Golden flower (diploid) 2	21.386
	CNS0095603	Golden flower (diploid) 3	25.349
	CNS0095604	Slightly white alabastrum(tetraploid) 1	26.740
	CNS0095605	Slightly white alabastrum(tetraploid) 2	21.777
	CNS0095606	Slightly white alabastrum(tetraploid) 3	40.783
	CNS0095607	Whole white alabastrum(tetraploid) 1	22.478
	CNS0095608	Whole white alabastrum(tetraploid) 2	22.193
	CNS0095609	Whole white alabastrum(tetraploid) 3	31.217
	CNS0095610	Silvery flower (tetraploid) 1	28.170
	CNS0095611	Silvery flower (tetraploid) 2	23.926
	CNS0095612	Silvery flower (tetraploid) 3	22.668
	CNS0095613	Golden flower (tetraploid) 1	12.682
	CNS0095614	Golden flower (tetraploid) 2	21.995
	CNS0095615	Golden flower (tetraploid) 3	12.262
CRA001975	CRR073297	Stem 1	26.905
	CRR073298	Stem 2	26.130
	CRR073299	Stem 3	22.941
	CRR073300	Leaf 1	32.399
	CRR073301	Leaf 2	26.767
	CRR073302	Leaf 3	23.539
	CRR073303	Juvenile bud 1	25.657
	CRR073304	Juvenile bud 2	19.258
	CRR073305	Juvenile bud 3	33.592
	CRR073306	Third green 1	12.725
	CRR073307	Third green 2	11.348
	CRR073308	Third green 3	13.119
	CRR073309	Second white 1	8.481
	CRR073310	Second white 2	15.361
	CRR073311	Second white 3	13.014
	CRR073312	Silver flowering 1	13.567
	CRR073313	Silver flowering 2	11.228
	CRR073314	Silver flowering 3	11.004
	CRR073315	Gold flowering 1	5.841
	CRR073316	Gold flowering 2	10.067
	CRR073317	Gold flowering 3	5.616
	CRR073318	Tawny withering 1	27.364
	CRR073319	Tawny withering 2	23.634
	CRR073320	Tawny withering 3	24.873