Detail information of GWHGAAZE030581


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007209421.11.79048E-15hypothetical protein PRUPE_ppa009377mg [Prunus persica]
Swissprottr|Q8L539|5FCL_ARATH3E-105-formyltetrahydrofolate cyclo-ligase, mitochondrial (Precursor)
trEMBLtr|M5WV05|M5WV05_PRUPE7E-16Uncharacterized protein {ECO:0000313|EMBL:EMJ10620.1}
TAIR10AT5G13050.10.0000015-formyltetrahydrofolate cycloligase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4564205145643892+
GWHAAZE00000009mRNA4564205145643892+
GWHAAZE00000009exon4564205145642363+
GWHAAZE00000009exon4564344545643538+
GWHAAZE00000009exon4564379345643892+
GWHAAZE00000009CDS4564205145642363+
GWHAAZE00000009CDS4564344545643538+
GWHAAZE00000009CDS4564379345643892+
Transcript Sequence

Network for GWHGAAZE030581

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01934MTHFS Metabolic pathways map01100
One carbon pool by folatemap00670

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf17.404
SRR3591706second leaf18.055
SRR3591707mature leaf20.465
SRR3591708Shoot apex13.331
SRR3591709Stem22.724
SRR3591710White floral bud14.585
SRR3591711White flower18.998
SRR3591712Green floral bud13.386
SRR3591713Yellow flower17.277
SRP173429 SRR8316895Juvenile bud stage 8.918
SRR8316896Juvenile bud stage 15.772
SRR8316897Juvenile bud stage 6.161
SRR8316894Third green stage 4.603
SRR8316900Third green stage 13.081
SRR8316901Third green stage 20.944
SRR8316898Complete white stage 7.951
SRR8316899Complete white stage 17.445
SRR8316903Complete white stage 13.996
SRR8316902Silver flowering stage14.733
SRR8316904Silver flowering stage14.198
SRR8316905Silver flowering stage13.270
SRR8316906Gold flowering stage 36.716
SRR8316907Gold flowering stage 33.917
SRR8316908Gold flowering stage 32.328
SRP132670SRR6706286Control14.186
SRR6706287Light intensity 50%13.708
SRR6706288Light intensity 20%13.675
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.321
CNS0095593Slightly white alabastrum(diploid) 24.224
CNS0095594Slightly white alabastrum(diploid) 35.279
CNS0095595Whole white alabastrum(diploid) 27.622
CNS0095596Whole white alabastrum(diploid) 37.455
CNS0095597Whole white alabastrum(diploid) 45.995
CNS0095598Silvery flower (diploied) 115.201
CNS0095599Silvery flower (diploied) 214.820
CNS0095600Silvery flower (diploied) 327.027
CNS0095601Golden flower (diploid) 112.663
CNS0095602Golden flower (diploid) 219.633
CNS0095603Golden flower (diploid) 320.200
CNS0095604Slightly white alabastrum(tetraploid) 18.768
CNS0095605Slightly white alabastrum(tetraploid) 28.172
CNS0095606Slightly white alabastrum(tetraploid) 310.398
CNS0095607Whole white alabastrum(tetraploid) 111.011
CNS0095608Whole white alabastrum(tetraploid) 29.447
CNS0095609Whole white alabastrum(tetraploid) 38.214
CNS0095610Silvery flower (tetraploid) 118.240
CNS0095611Silvery flower (tetraploid) 224.947
CNS0095612Silvery flower (tetraploid) 317.572
CNS0095613Golden flower (tetraploid) 114.573
CNS0095614Golden flower (tetraploid) 225.516
CNS0095615Golden flower (tetraploid) 335.405
CRA001975CRR073297Stem 14.171
CRR073298Stem 25.233
CRR073299Stem 35.641
CRR073300Leaf 15.796
CRR073301Leaf 25.556
CRR073302Leaf 34.054
CRR073303Juvenile bud 13.952
CRR073304Juvenile bud 28.531
CRR073305Juvenile bud 35.587
CRR073306Third green 17.579
CRR073307Third green 24.630
CRR073308Third green 34.844
CRR073309Second white 18.995
CRR073310Second white 26.842
CRR073311Second white 37.742
CRR073312Silver flowering 18.000
CRR073313Silver flowering 27.129
CRR073314Silver flowering 33.117
CRR073315Gold flowering 110.119
CRR073316Gold flowering 212.505
CRR073317Gold flowering 311.772
CRR073318Tawny withering 15.051
CRR073319Tawny withering 23.558
CRR073320Tawny withering 36.466