Gene detail

Detail information of GWHGAAZE030552

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_010663203.1	PREDICTED: uncharacterized protein LOC100248456 [Vitis vinifera]
trEMBL	tr\|F6GSU6\|F6GSU6_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB43003.1}
TAIR10	AT3G48050.2	BAH domain ;TFIIS helical bundle-like domain

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	45164830	45174751	-
GWHAAZE00000009	mRNA	45164830	45174751	-
GWHAAZE00000009	exon	45174680	45174751	-
GWHAAZE00000009	exon	45169449	45169823	-
GWHAAZE00000009	exon	45164830	45169254	-
GWHAAZE00000009	CDS	45174680	45174751	-
GWHAAZE00000009	CDS	45169449	45169823	-
GWHAAZE00000009	CDS	45164830	45169254	-

Transcript Sequence
>GWHTAAZE030586 ATGAGGTCGGTCCCCACGACGAGGACTGTAGAGCACGATTCTTTAGCTTCTACTTCTGATTCCTTCTTCAAGGACAGTCGCAGAATTAGCGTTGGTGACTGTGCTCTTTTCAAACCGCCCCAGGATTATCCCCCTTTCATTGGTATAATCCGTTGGTTATCATTCTCTAAAGACAATAATAATCTCCTGTTAGGTGTAAATTGGCTTTATCGACCAGCTGAAGTAAATCTTGGCAAAGGTGTCCAGCTGGACGCTGCGCCAAACGAAATCTTCTATTCGTTCCATAAGGATGAAATACCTGCTGCATCTTTACTCCATCCGTGTAAAGTTGCATTCCTTCCCAAAGGTGTTGAACTTTCTTCAGGGATATCCTCTTTTGTTTGCCGGCGAGTTTATGACATTGCAAACAAGTGTTTGTGGTGGTTAACTGACCAAGATTATATTGATGAGCGACAGGAAGAAGTAGATCAGCTGTTATATAAAACAAGAACCGAAATGCATGCTACAGTGCAGCCTGGTGGCCGTTCACCAAAACAGTTGAGTATTAACACATCGTCGCAGTTGAAACCTGCTTCAGATAATGTGCAGAGTAGTTCGACTTCCTACCCTTCTCAAGTTAAGCGAAAGAAAAGGGAAGATAGAGATCAGGGATCTGAACCTTCCAAACGCGAATGTTCTTCAAAATCAGATGATGGCGACTCTGGTCAGGTTAAAGCAGGAAGTGTATTGAAATCAGAGATAGCTAAAATAACTGAAAAAGGAGGTCTGATAAATGCTGCAGGGGTTGAGAAACTGGTGCAACTGATGCAACCAGATAGAGAAGAGAGGAAGATAGATTTGGTTTGCCGCTCAGTGCTAGCAGGAGTGATAGCAGGCACTGATAGATTTGACTGCCTAAGTTGGTTTGTACAGCTCAAGGGTTTGCCTATATTGGATGAATGGCTCCAAGACGTCCACAGGGGGAAAATCGGTGATGGTAGTAGTGTCCCTAAGAATGGTGATAAAACTGTCGAGGAATTTCTCTTGGTATTACTTCGCGCACTTGATAAACTCCCTGTAAATCTTCATGCTCTACAAATGTGTAATATTGGCAGATCGGTGAATCATTTGCGTACAAATAAAAATATTGAAATTCAGAAGAAGGCCAGGAGCTTAGTTGACACCTGGAAGAAACGTGTTGAGGCTGAAATGAATAGTATCGATTCAAAGTCAGGCTCTTCTCAGCCTGTTTCTTGGTCTTCTAAGTCACGTATTCCTGAGGTTTCCCATGGTGGGAACAGACACCCCGGGGTCTCCTCTGAGATTGCTACAAAGAGCTCAGTCACACATATTTCTGCGTCTAAAACTTCTTCAATGAAGCCTGTCCGTGGAGAAACTACTACAAAATCTGCATCTTCATCTCCGAGGCCAATGAGAGGAGGAGCACTGTCATCTGGATCAGGTAAGGATGGTCACCCCAGAATTTCAGTTGGAAGTGCATCTGATCTTCCTTTAACAACAGCAAGGGAGGAAAAGAGCAGCAGTTCCAGTCAGTCTCACAACTGCAGTCAATCTTTGTCAGGGAAGGAGGACGCAAGGAGCTCTACTGCAGGTTCAATGAGTGTCAATAAGATTTCCAGTGGTACATCTCGACATCAGAAGTTAATCAATGGGTTCCCTGTATCTGTAGTTCAAAGAGAAACTGGGTCGAGCAGAACTTCATCACTGCACAGGACTTCGGTCTTAGAAAGATCATCAGTGTCGGGATTAACATGCGAAAAGGCAGTTGTTCCTGTTGTGGAAGGGAACAGTCGAAAGTTGATTGTGAAGATACCGAATCGGGGGCGAAGTCCTGCAGAGAGTGGCAGTGGAGCTTCTTTTGAAGATCGTTCCCTGTTGAATGGCAGAGCTTCTTCTCCTGTACGATTGGACAAACATGATCAATCTGTTAGTAATTCGAAAGAAAAAGGTGATGGCTATCGAGCTAATATTACCCCTGATGTGAATACCGAATTTTGCCAAAGCAATGATTTTAAAGATTTATTGACTGGGTCTGATGAAGTTAGTGGGTCACCTGATGCTGTTCATGATGAAGAAAGGAGGACAGTTGATGATACAAGGAAATCAAGTGAAGTCTCTAAAGCCGGGTCCTCGTCATCGGGAAATGAACTGAAATCAGGGAAACTGAACGAGGCCTCTTTCAGCTCTATGAACGCATTAATTGAAAGCTGTGTCAAATGCTCCGAGGCAAATGCATCTTTGTCAGTTGGGGATGATGTTGGAATCAAACTGCTTGCTAGCGTAGCAGCTGGAGAAATTTCTAAGTCTGATTTAGTGTCACCAACTCAATCTCCACAAAGAAATACTCCTGTACTCGAGAATACTAGATCCGAATTATCTCCTACAGATATACTTGCTCAAGGCCAAAGTAAACCTGATAATAGTGATGATAGTGATAATGGTGAAAATGGGAAGCAGAATGGGTTTGTTGGCATTTCCAGGTCTAATGCTGGACTAGGTTCGTCTGAACATGCATCAGCAGGTTTTTCTGGGGATAGGAAAATCTCATCTTTCTCATCTGAAGAACCACTGGTATGCAAATCTTCCAGTGTGGATCTGCAACCAACTGCAGATCCATTTGTTGAGACCAGTGAAAAGTTGGATGAAATCAAAGGTGCTGCCTCCCCTTTGGGCATGTCAAAGAAACTAACGGATGTTGAAGTAAGCAATACTGAGGAAAGGGTAGTTACTAACAACTCAAGTCTTGATGGCCTTCCAGATATTAAACCAAGGGGGAACAATCCTTTGTTTAGAGTCAATGATCCAAGTGTAAAAGACGAGAAGCGAGGTGTTGAAGGTTCATCATCATCCCATCTACTAGAAAATGAGGGTGAGCATGTTGTGGATCAAAGGCTTGATGGTGGTGGTTATGCAGAGCAGAAGCCACCCACAATGAAGATGGATCCCGAGCCTGTAGATGAAGCGGATGAAGAATTGCCGCATTCTTCTAGTTCGGTCAAAAATTTGGTTCTAGAAGTTGATGAGTCCAGTGTCAGAAAGGCTGAAAAGATGGATACGAGCAGTTTGCTTGGTCAGGATAAAGAACAATTTGACCGGGAAACTGAAAATCTGAGAGATAATGTAAATCAAGGGTTAGTTGGGTTGGGTTCATCTTTTACCAATCAGAAAAGCGAGTGTGTGGAGGAAAATATTGATGGTGCAGAGGTTCGGGAGCACCCTTCTGGTGAAGTTCATCATAAAGAGTCACCTGCATCTCCTTCTCAAGGAACGGAACCAGATGAGGGATTAAGAGAATCCAAAGTGACTGATGTTGAAGCAGAAGAAACAGAGGAATGTGCATCGACAACAGCAGATATTTCTTCCTTCTCAGCTTCAGGGCCGCCTCATATGGATGCAAAAGTGAAATTTGATCTGAACGAAGGCGTTGTTGGGGATGATGAGAAATTTGGAGAGCCACTTAATAAATTGACAGCTCTTTCTGCATATCCGTCAGTTCATTTGATGAACCAATTGCCTTTTCCTGTTTCTTCAGTCTCCGGCAGCCTTCCTGCTTCCATTACAGTTGCTGCTGCTGCAAAAAGGCCCTTTCTTCCTCCTGAGGATCTACTGAGGTGTAAAGGGGAACTTGGATGGAAGGGGTCAGCTGCAACAAGTGCATTTCGACCAGCCGAACCCAGAAAGGTTCCAGAAGTGGTGCCTATGGTAACAACCAACATACCTATCCCTGATGCTACTGCAACTGGACATGGCCGGCCAACGTTGGATATTGATCTGAATGCACCAGGTGAAGGAGTTCTCGATGATATGGCTTCTCAAGACACTGTTGCAGCGACAGTTTCTGCGTTTAAGTGTGATTTGGCAACTGCTTGTGGCTCTGGAAGGCTTCATCTTGATTTGAACCAAGTTGACGAGGGTAATGATATGGTGCAGCACTCAACTTGCAGTGGTCGTGGATTGCAGTTCCCACTTCTGCCAGTTAAATCATCATCATCATCGGGTGGGTTTCCTAATGGTGAGGTGAGGAGAGACTTCGATTTAAACAATGGGCCTGCCCTTGAGGATACAAGTGCCGAACCTATATTTAACCGACGGGGTGGTGGTAGCATGCAACAGCAGCCACCTGTTGGCGGCATCAGAATGAACAATGCAGAAATAGGGAACTTTTCATCATCATGGTTTGCTCCTCCTGGGAACGCTTTCTCACCAGTTGCACTTCCATCAATCTTGTCCAACAGAGGGGAGAAACCTTTTCCTGGCATGGCTCCTGGTGCACCACAAATAGTTGCGCCTGGCGGTGCACCACAAAGAATATTGGGTCCTTCAACTGGTGGTTCCCATTTTACGCCCGATGTGTACTGGGGCTCGGTGTTGTCTTCATCTCCTACAGTCCCCTTTCCCACTACTCCCTTCCAATATCCTGTCTTCCCCTTTGGGACCAGTTTTCCGATGCCTTCTTCCACACTTACTGCTGGATCAGCCACTTACATGGATTCCTCATCAGGTGGGAGGATTTGTTTCCCTGCCATTAATAATTCACAGTTACAAGGACCTGCTGCTGGTTCATCTCAATACCCACGCCCTTACATGGTTAGTAACCTACAAGATGGTAGCAGCAATGGTGGTATGGAGAACAATCGAAAATGGAGCAGGCAGGGTCTAGATCTTAATGCAGGGCCTGGTGGACCGGACATAGAAGGAAGAGATGAGACATTTTGTCTACCATCAAGACAGCATTCATTTGCCAGTCAACAAGCTCTAGCGGAGGAGCAAGCAAGGATGCTACAGATGGCAGGCGGCCTTCATAAGAGGAAGGAGCCCGATGGAGGGTGGGATACAGAGGGCATCAGGTACAAGCAATCCTCATGGCAGTGA

Network for GWHGAAZE030552

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01426.19	BAH	29	136	2.00E-09
PF08711.12	Med26	344	393	8.60E-10

Protein Sequence

>GWHPAAZE030570
MRSVPTTRTVEHDSLASTSDSFFKDSRRISVGDCALFKPPQDYPPFIGIIRWLSFSKDNNNLLLGVNWLYRPAEVNLGKGVQLDAAPNEIFYSFHKDEIPAASLLHPCKVAFLPKGVELSSGISSFVCRRVYDIANKCLWWLTDQDYIDERQEEVDQLLYKTRTEMHATVQPGGRSPKQLSINTSSQLKPASDNVQSSSTSYPSQVKRKKREDRDQGSEPSKRECSSKSDDGDSGQVKAGSVLKSEIAKITEKGGLINAAGVEKLVQLMQPDREERKIDLVCRSVLAGVIAGTDRFDCLSWFVQLKGLPILDEWLQDVHRGKIGDGSSVPKNGDKTVEEFLLVLLRALDKLPVNLHALQMCNIGRSVNHLRTNKNIEIQKKARSLVDTWKKRVEAEMNSIDSKSGSSQPVSWSSKSRIPEVSHGGNRHPGVSSEIATKSSVTHISASKTSSMKPVRGETTTKSASSSPRPMRGGALSSGSGKDGHPRISVGSASDLPLTTAREEKSSSSSQSHNCSQSLSGKEDARSSTAGSMSVNKISSGTSRHQKLINGFPVSVVQRETGSSRTSSLHRTSVLERSSVSGLTCEKAVVPVVEGNSRKLIVKIPNRGRSPAESGSGASFEDRSLLNGRASSPVRLDKHDQSVSNSKEKGDGYRANITPDVNTEFCQSNDFKDLLTGSDEVSGSPDAVHDEERRTVDDTRKSSEVSKAGSSSSGNELKSGKLNEASFSSMNALIESCVKCSEANASLSVGDDVGIKLLASVAAGEISKSDLVSPTQSPQRNTPVLENTRSELSPTDILAQGQSKPDNSDDSDNGENGKQNGFVGISRSNAGLGSSEHASAGFSGDRKISSFSSEEPLVCKSSSVDLQPTADPFVETSEKLDEIKGAASPLGMSKKLTDVEVSNTEERVVTNNSSLDGLPDIKPRGNNPLFRVNDPSVKDEKRGVEGSSSSHLLENEGEHVVDQRLDGGGYAEQKPPTMKMDPEPVDEADEELPHSSSSVKNLVLEVDESSVRKAEKMDTSSLLGQDKEQFDRETENLRDNVNQGLVGLGSSFTNQKSECVEENIDGAEVREHPSGEVHHKESPASPSQGTEPDEGLRESKVTDVEAEETEECASTTADISSFSASGPPHMDAKVKFDLNEGVVGDDEKFGEPLNKLTALSAYPSVHLMNQLPFPVSSVSGSLPASITVAAAAKRPFLPPEDLLRCKGELGWKGSAATSAFRPAEPRKVPEVVPMVTTNIPIPDATATGHGRPTLDIDLNAPGEGVLDDMASQDTVAATVSAFKCDLATACGSGRLHLDLNQVDEGNDMVQHSTCSGRGLQFPLLPVKSSSSSGGFPNGEVRRDFDLNNGPALEDTSAEPIFNRRGGGSMQQQPPVGGIRMNNAEIGNFSSSWFAPPGNAFSPVALPSILSNRGEKPFPGMAPGAPQIVAPGGAPQRILGPSTGGSHFTPDVYWGSVLSSSPTVPFPTTPFQYPVFPFGTSFPMPSSTLTAGSATYMDSSSGGRICFPAINNSQLQGPAAGSSQYPRPYMVSNLQDGSSNGGMENNRKWSRQGLDLNAGPGGPDIEGRDETFCLPSRQHSFASQQALAEEQARMLQMAGGLHKRKEPDGGWDTEGIRYKQSSWQ

Gene family

Gene family	subfamily
Transcription Factors Family	IWS1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005634	cellular_component	nucleus
GO:0003682	molecular_function	chromatin binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	27.785
	SRR3591706	second leaf	21.949
	SRR3591707	mature leaf	27.675
	SRR3591708	Shoot apex	25.345
	SRR3591709	Stem	33.245
	SRR3591710	White floral bud	40.701
	SRR3591711	White flower	43.025
	SRR3591712	Green floral bud	27.899
	SRR3591713	Yellow flower	33.386
SRP173429	SRR8316895	Juvenile bud stage	14.662
	SRR8316896	Juvenile bud stage	21.315
	SRR8316897	Juvenile bud stage	9.079
	SRR8316894	Third green stage	10.726
	SRR8316900	Third green stage	23.514
	SRR8316901	Third green stage	24.052
	SRR8316898	Complete white stage	11.320
	SRR8316899	Complete white stage	29.076
	SRR8316903	Complete white stage	29.544
	SRR8316902	Silver flowering stage	14.278
	SRR8316904	Silver flowering stage	25.281
	SRR8316905	Silver flowering stage	11.753
	SRR8316906	Gold flowering stage	38.970
	SRR8316907	Gold flowering stage	35.541
	SRR8316908	Gold flowering stage	40.758
SRP132670	SRR6706286	Control	22.631
	SRR6706287	Light intensity 50%	23.254
	SRR6706288	Light intensity 20%	24.475
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	12.329
	CNS0095593	Slightly white alabastrum(diploid) 2	12.187
	CNS0095594	Slightly white alabastrum(diploid) 3	10.600
	CNS0095595	Whole white alabastrum(diploid) 2	10.686
	CNS0095596	Whole white alabastrum(diploid) 3	9.154
	CNS0095597	Whole white alabastrum(diploid) 4	9.437
	CNS0095598	Silvery flower (diploied) 1	18.352
	CNS0095599	Silvery flower (diploied) 2	13.709
	CNS0095600	Silvery flower (diploied) 3	40.513
	CNS0095601	Golden flower (diploid) 1	17.752
	CNS0095602	Golden flower (diploid) 2	42.325
	CNS0095603	Golden flower (diploid) 3	40.208
	CNS0095604	Slightly white alabastrum(tetraploid) 1	15.233
	CNS0095605	Slightly white alabastrum(tetraploid) 2	10.900
	CNS0095606	Slightly white alabastrum(tetraploid) 3	33.633
	CNS0095607	Whole white alabastrum(tetraploid) 1	9.424
	CNS0095608	Whole white alabastrum(tetraploid) 2	8.561
	CNS0095609	Whole white alabastrum(tetraploid) 3	21.706
	CNS0095610	Silvery flower (tetraploid) 1	38.546
	CNS0095611	Silvery flower (tetraploid) 2	39.218
	CNS0095612	Silvery flower (tetraploid) 3	47.026
	CNS0095613	Golden flower (tetraploid) 1	20.369
	CNS0095614	Golden flower (tetraploid) 2	33.812
	CNS0095615	Golden flower (tetraploid) 3	54.134
CRA001975	CRR073297	Stem 1	29.624
	CRR073298	Stem 2	26.663
	CRR073299	Stem 3	22.552
	CRR073300	Leaf 1	30.687
	CRR073301	Leaf 2	23.327
	CRR073302	Leaf 3	20.428
	CRR073303	Juvenile bud 1	21.387
	CRR073304	Juvenile bud 2	17.843
	CRR073305	Juvenile bud 3	32.686
	CRR073306	Third green 1	31.374
	CRR073307	Third green 2	18.095
	CRR073308	Third green 3	28.995
	CRR073309	Second white 1	25.834
	CRR073310	Second white 2	32.285
	CRR073311	Second white 3	38.794
	CRR073312	Silver flowering 1	30.783
	CRR073313	Silver flowering 2	29.509
	CRR073314	Silver flowering 3	24.646
	CRR073315	Gold flowering 1	10.968
	CRR073316	Gold flowering 2	17.397
	CRR073317	Gold flowering 3	13.686
	CRR073318	Tawny withering 1	17.351
	CRR073319	Tawny withering 2	13.776
	CRR073320	Tawny withering 3	14.222