Detail information of GWHGAAZE030463


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP30999.10hypothetical protein JCGZ_11375 [Jatropha curcas]
COGYP_005066864.11E-42serine/threonine protein kinase with WD-40 repeats
Swissprottr|Q8W1K8|MUT11_CHLRE3E-25Protein Mut11
trEMBLtr|A0A067KGM4|A0A067KGM4_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP30999.1}
TAIR10AT5G50230.10Transducin/WD40 repeat-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4404228444043866-
GWHAAZE00000009mRNA4404228444043866-
GWHAAZE00000009exon4404228444043306-
GWHAAZE00000009exon4404338444043539-
GWHAAZE00000009exon4404365744043866-
GWHAAZE00000009CDS4404365744043866-
GWHAAZE00000009CDS4404338444043539-
GWHAAZE00000009CDS4404228444043306-
Transcript Sequence

Network for GWHGAAZE030463

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08614.12ATG1671211.80E-08
PF00400.33WD401832060.13
PF00400.33WD402542916.50E-06
PF00400.33WD402963320.00011
PF00400.33WD403994200.02
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
K17890ATG16L1 Autophagy - animal map04140
Autophagy - yeastmap04138
Autophagy - othermap04136
NOD-like receptor signaling pathwaymap04621

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.542
SRR3591706second leaf5.818
SRR3591707mature leaf8.158
SRR3591708Shoot apex10.057
SRR3591709Stem12.584
SRR3591710White floral bud14.020
SRR3591711White flower14.215
SRR3591712Green floral bud14.657
SRR3591713Yellow flower14.534
SRP173429 SRR8316895Juvenile bud stage 8.177
SRR8316896Juvenile bud stage 10.569
SRR8316897Juvenile bud stage 5.919
SRR8316894Third green stage 4.908
SRR8316900Third green stage 19.700
SRR8316901Third green stage 15.963
SRR8316898Complete white stage 10.671
SRR8316899Complete white stage 27.681
SRR8316903Complete white stage 15.125
SRR8316902Silver flowering stage7.723
SRR8316904Silver flowering stage13.221
SRR8316905Silver flowering stage6.221
SRR8316906Gold flowering stage 15.256
SRR8316907Gold flowering stage 16.609
SRR8316908Gold flowering stage 15.434
SRP132670SRR6706286Control12.021
SRR6706287Light intensity 50%12.354
SRR6706288Light intensity 20%13.849
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.967
CNS0095593Slightly white alabastrum(diploid) 29.808
CNS0095594Slightly white alabastrum(diploid) 38.526
CNS0095595Whole white alabastrum(diploid) 28.197
CNS0095596Whole white alabastrum(diploid) 38.577
CNS0095597Whole white alabastrum(diploid) 48.986
CNS0095598Silvery flower (diploied) 111.749
CNS0095599Silvery flower (diploied) 29.323
CNS0095600Silvery flower (diploied) 318.781
CNS0095601Golden flower (diploid) 110.705
CNS0095602Golden flower (diploid) 219.780
CNS0095603Golden flower (diploid) 318.947
CNS0095604Slightly white alabastrum(tetraploid) 112.572
CNS0095605Slightly white alabastrum(tetraploid) 28.638
CNS0095606Slightly white alabastrum(tetraploid) 317.236
CNS0095607Whole white alabastrum(tetraploid) 19.758
CNS0095608Whole white alabastrum(tetraploid) 29.283
CNS0095609Whole white alabastrum(tetraploid) 315.034
CNS0095610Silvery flower (tetraploid) 120.251
CNS0095611Silvery flower (tetraploid) 219.507
CNS0095612Silvery flower (tetraploid) 319.151
CNS0095613Golden flower (tetraploid) 112.938
CNS0095614Golden flower (tetraploid) 215.412
CNS0095615Golden flower (tetraploid) 320.040
CRA001975CRR073297Stem 118.668
CRR073298Stem 215.384
CRR073299Stem 320.759
CRR073300Leaf 120.215
CRR073301Leaf 217.637
CRR073302Leaf 320.725
CRR073303Juvenile bud 121.551
CRR073304Juvenile bud 218.915
CRR073305Juvenile bud 321.717
CRR073306Third green 117.328
CRR073307Third green 214.821
CRR073308Third green 314.190
CRR073309Second white 115.404
CRR073310Second white 214.658
CRR073311Second white 313.497
CRR073312Silver flowering 117.230
CRR073313Silver flowering 217.006
CRR073314Silver flowering 315.997
CRR073315Gold flowering 111.528
CRR073316Gold flowering 213.843
CRR073317Gold flowering 311.954
CRR073318Tawny withering 113.242
CRR073319Tawny withering 211.866
CRR073320Tawny withering 313.823