Detail information of GWHGAAZE030263


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011092928.10PREDICTED: proton-coupled amino acid transporter 3-like [Sesamum indicum]
Swissprottr|Q9C9J0|LHTL5_ARATH0.00000004Lysine histidine transporter-like 5
trEMBLtr|F6H4D0|F6H4D0_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB47141.1}
TAIR10AT2G42005.17E-148Transmembrane amino acid transporter family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4076997540771270-
GWHAAZE00000009mRNA4076997540771270-
GWHAAZE00000009exon4077085640771270-
GWHAAZE00000009exon4076997540770825-
GWHAAZE00000009CDS4077085640771270-
GWHAAZE00000009CDS4076997540770825-
Transcript Sequence

Network for GWHGAAZE030263

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.19Aa_trans344133.10E-65
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14209SLC36A, PAT Autophagy - yeast map04138
Protein digestion and absorptionmap04974

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.886
SRR3591706second leaf0.803
SRR3591707mature leaf0.313
SRR3591708Shoot apex1.689
SRR3591709Stem0.811
SRR3591710White floral bud7.459
SRR3591711White flower0.313
SRR3591712Green floral bud13.398
SRR3591713Yellow flower0.079
SRP173429 SRR8316895Juvenile bud stage 4.601
SRR8316896Juvenile bud stage 10.438
SRR8316897Juvenile bud stage 2.391
SRR8316894Third green stage 3.203
SRR8316900Third green stage 14.442
SRR8316901Third green stage 12.610
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.527
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.289
SRR8316904Silver flowering stage0.048
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.057
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control5.519
SRR6706287Light intensity 50%4.735
SRR6706288Light intensity 20%3.853
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.229
CNS0095593Slightly white alabastrum(diploid) 210.111
CNS0095594Slightly white alabastrum(diploid) 316.843
CNS0095595Whole white alabastrum(diploid) 220.851
CNS0095596Whole white alabastrum(diploid) 327.617
CNS0095597Whole white alabastrum(diploid) 422.672
CNS0095598Silvery flower (diploied) 10.711
CNS0095599Silvery flower (diploied) 21.735
CNS0095600Silvery flower (diploied) 30.424
CNS0095601Golden flower (diploid) 10.524
CNS0095602Golden flower (diploid) 20.311
CNS0095603Golden flower (diploid) 30.580
CNS0095604Slightly white alabastrum(tetraploid) 114.650
CNS0095605Slightly white alabastrum(tetraploid) 215.886
CNS0095606Slightly white alabastrum(tetraploid) 31.280
CNS0095607Whole white alabastrum(tetraploid) 121.934
CNS0095608Whole white alabastrum(tetraploid) 225.673
CNS0095609Whole white alabastrum(tetraploid) 315.543
CNS0095610Silvery flower (tetraploid) 10.086
CNS0095611Silvery flower (tetraploid) 20.750
CNS0095612Silvery flower (tetraploid) 30.683
CNS0095613Golden flower (tetraploid) 10.102
CNS0095614Golden flower (tetraploid) 20.054
CNS0095615Golden flower (tetraploid) 30.821
CRA001975CRR073297Stem 13.607
CRR073298Stem 23.478
CRR073299Stem 33.973
CRR073300Leaf 16.911
CRR073301Leaf 26.687
CRR073302Leaf 33.344
CRR073303Juvenile bud 14.857
CRR073304Juvenile bud 25.788
CRR073305Juvenile bud 30.363
CRR073306Third green 11.975
CRR073307Third green 21.718
CRR073308Third green 31.088
CRR073309Second white 10.114
CRR073310Second white 20.277
CRR073311Second white 30.148
CRR073312Silver flowering 11.934
CRR073313Silver flowering 22.695
CRR073314Silver flowering 30.642
CRR073315Gold flowering 12.219
CRR073316Gold flowering 20.321
CRR073317Gold flowering 31.103
CRR073318Tawny withering 13.067
CRR073319Tawny withering 21.129
CRR073320Tawny withering 31.638