Detail information of GWHGAAZE030084


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU42590.18.08466E-68hypothetical protein MIMGU_mgv1a0019152mg, partial [Erythranthe guttata]
COGYP_006861330.11E-14minichromosome maintenance complex protein
Swissprottr|Q0WVF5|MCM4_ARATH5E-64DNA replication licensing factor MCM4
trEMBLtr|A0A022RUI3|A0A022RUI3_ERYGU3E-68Uncharacterized protein {ECO:0000313|EMBL:EYU42590.1} (Fragment)
TAIR10AT2G16440.14E-53Minichromosome maintenance (MCM2/3/5) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3791280137914359-
GWHAAZE00000009mRNA3791280137914359-
GWHAAZE00000009exon3791280137912900-
GWHAAZE00000009exon3791299837913045-
GWHAAZE00000009exon3791311337913274-
GWHAAZE00000009exon3791361737913653-
GWHAAZE00000009exon3791398437914163-
GWHAAZE00000009exon3791426337914359-
GWHAAZE00000009CDS3791426337914359-
GWHAAZE00000009CDS3791398437914163-
GWHAAZE00000009CDS3791361737913653-
GWHAAZE00000009CDS3791311337913274-
GWHAAZE00000009CDS3791299837913045-
GWHAAZE00000009CDS3791280137912900-
Transcript Sequence

Network for GWHGAAZE030084

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF17207.4MCM_OB261578.50E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02212MCM4, CDC54 DNA replication map03030
Cell cyclemap04110
Cell cycle - yeastmap04111
Meiosis - yeastmap04113

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.152
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.115
SRR3591709Stem0.000
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.087
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.040
SRR8316896Juvenile bud stage 0.153
SRR8316897Juvenile bud stage 0.056
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.000
SRR8316901Third green stage 0.039
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.040
SRR8316904Silver flowering stage0.139
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 1.040
SRR8316907Gold flowering stage 0.563
SRR8316908Gold flowering stage 0.195
SRP132670SRR6706286Control0.000
SRR6706287Light intensity 50%0.070
SRR6706288Light intensity 20%0.000
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.000
CNS0095593Slightly white alabastrum(diploid) 20.212
CNS0095594Slightly white alabastrum(diploid) 30.000
CNS0095595Whole white alabastrum(diploid) 20.117
CNS0095596Whole white alabastrum(diploid) 30.045
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.087
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.047
CNS0095602Golden flower (diploid) 20.077
CNS0095603Golden flower (diploid) 30.054
CNS0095604Slightly white alabastrum(tetraploid) 10.108
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.027
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.028
CRR073298Stem 20.168
CRR073299Stem 30.012
CRR073300Leaf 10.000
CRR073301Leaf 20.052
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.922
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.070
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000