Detail information of GWHGAAZE029457


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO47805.12.46811E-37hypothetical protein CISIN_1g018854mg [Citrus sinensis]
Swissprottr|Q8GSJ1|HIS1B_ARATH5E-35ATP phosphoribosyltransferase 2, chloroplastic (Precursor)
trEMBLtr|A0A067E1S6|A0A067E1S6_CITSI9E-38Uncharacterized protein {ECO:0000313|EMBL:KDO47805.1}
TAIR10AT1G58080.12E-30ATP phosphoribosyl transferase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene2332644423327058-
GWHAAZE00000009mRNA2332644423327058-
GWHAAZE00000009exon2332689423327058-
GWHAAZE00000009exon2332669623326803-
GWHAAZE00000009exon2332644423326563-
GWHAAZE00000009CDS2332689423327058-
GWHAAZE00000009CDS2332669623326803-
GWHAAZE00000009CDS2332644423326563-
Transcript Sequence

Network for GWHGAAZE029457

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00765hisG Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of amino acidsmap01230
Histidine metabolismmap00340

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf19.975
SRR3591706second leaf13.588
SRR3591707mature leaf9.315
SRR3591708Shoot apex24.371
SRR3591709Stem13.804
SRR3591710White floral bud1.512
SRR3591711White flower3.300
SRR3591712Green floral bud3.206
SRR3591713Yellow flower1.270
SRP173429 SRR8316895Juvenile bud stage 2.203
SRR8316896Juvenile bud stage 5.390
SRR8316897Juvenile bud stage 0.264
SRR8316894Third green stage 1.336
SRR8316900Third green stage 2.482
SRR8316901Third green stage 2.806
SRR8316898Complete white stage 0.431
SRR8316899Complete white stage 1.598
SRR8316903Complete white stage 0.254
SRR8316902Silver flowering stage0.120
SRR8316904Silver flowering stage0.205
SRR8316905Silver flowering stage0.086
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.229
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control1.410
SRR6706287Light intensity 50%1.393
SRR6706288Light intensity 20%1.391
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.795
CNS0095593Slightly white alabastrum(diploid) 21.859
CNS0095594Slightly white alabastrum(diploid) 34.475
CNS0095595Whole white alabastrum(diploid) 20.844
CNS0095596Whole white alabastrum(diploid) 30.315
CNS0095597Whole white alabastrum(diploid) 41.974
CNS0095598Silvery flower (diploied) 10.093
CNS0095599Silvery flower (diploied) 21.393
CNS0095600Silvery flower (diploied) 30.406
CNS0095601Golden flower (diploid) 10.659
CNS0095602Golden flower (diploid) 20.688
CNS0095603Golden flower (diploid) 30.372
CNS0095604Slightly white alabastrum(tetraploid) 118.716
CNS0095605Slightly white alabastrum(tetraploid) 217.696
CNS0095606Slightly white alabastrum(tetraploid) 320.248
CNS0095607Whole white alabastrum(tetraploid) 19.853
CNS0095608Whole white alabastrum(tetraploid) 27.692
CNS0095609Whole white alabastrum(tetraploid) 315.213
CNS0095610Silvery flower (tetraploid) 13.927
CNS0095611Silvery flower (tetraploid) 23.261
CNS0095612Silvery flower (tetraploid) 32.828
CNS0095613Golden flower (tetraploid) 10.629
CNS0095614Golden flower (tetraploid) 22.532
CNS0095615Golden flower (tetraploid) 30.288
CRA001975CRR073297Stem 11.930
CRR073298Stem 21.556
CRR073299Stem 31.090
CRR073300Leaf 11.433
CRR073301Leaf 20.971
CRR073302Leaf 31.092
CRR073303Juvenile bud 11.586
CRR073304Juvenile bud 20.986
CRR073305Juvenile bud 30.222
CRR073306Third green 10.034
CRR073307Third green 20.323
CRR073308Third green 30.157
CRR073309Second white 10.435
CRR073310Second white 20.221
CRR073311Second white 30.000
CRR073312Silver flowering 10.020
CRR073313Silver flowering 20.320
CRR073314Silver flowering 30.130
CRR073315Gold flowering 10.583
CRR073316Gold flowering 20.042
CRR073317Gold flowering 30.436
CRR073318Tawny withering 11.291
CRR073319Tawny withering 21.854
CRR073320Tawny withering 30.517