Detail information of GWHGAAZE029188


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002283435.10PREDICTED: GPI mannosyltransferase 2 [Vitis vinifera]
trEMBLtr|D7SLG2|D7SLG2_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI16490.3}
TAIR10AT1G11880.13E-136transferases, transferring hexosyl groups

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene98900339901453-
GWHAAZE00000009mRNA98900339901453-
GWHAAZE00000009exon99010909901453-
GWHAAZE00000009exon98971699897238-
GWHAAZE00000009exon98968159896907-
GWHAAZE00000009exon98965329896727-
GWHAAZE00000009exon98946079894785-
GWHAAZE00000009exon98930399893289-
GWHAAZE00000009exon98908939891068-
GWHAAZE00000009exon98900339890200-
GWHAAZE00000009CDS99010909901453-
GWHAAZE00000009CDS98971699897238-
GWHAAZE00000009CDS98968159896907-
GWHAAZE00000009CDS98965329896727-
GWHAAZE00000009CDS98946079894785-
GWHAAZE00000009CDS98930399893289-
GWHAAZE00000009CDS98908939891068-
GWHAAZE00000009CDS98900339890200-
Transcript Sequence

Network for GWHGAAZE029188

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04188.14Mannosyl_trans2184983.20E-129
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07542PIGV Metabolic pathways map01100
Glycosylphosphatidylinositolmap00563

Gene Ontology

GO term OntologyName
GO:0006506biological_processGPI anchor biosynthetic process
GO:0004584molecular_functionobsolete dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.490
SRR3591706second leaf2.984
SRR3591707mature leaf4.492
SRR3591708Shoot apex5.032
SRR3591709Stem4.339
SRR3591710White floral bud4.902
SRR3591711White flower2.707
SRR3591712Green floral bud6.196
SRR3591713Yellow flower2.969
SRP173429 SRR8316895Juvenile bud stage 4.643
SRR8316896Juvenile bud stage 6.727
SRR8316897Juvenile bud stage 1.580
SRR8316894Third green stage 2.886
SRR8316900Third green stage 8.855
SRR8316901Third green stage 6.294
SRR8316898Complete white stage 1.863
SRR8316899Complete white stage 7.138
SRR8316903Complete white stage 4.051
SRR8316902Silver flowering stage0.952
SRR8316904Silver flowering stage2.157
SRR8316905Silver flowering stage1.003
SRR8316906Gold flowering stage 2.469
SRR8316907Gold flowering stage 2.314
SRR8316908Gold flowering stage 2.306
SRP132670SRR6706286Control4.092
SRR6706287Light intensity 50%4.885
SRR6706288Light intensity 20%5.303
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.304
CNS0095593Slightly white alabastrum(diploid) 24.878
CNS0095594Slightly white alabastrum(diploid) 33.839
CNS0095595Whole white alabastrum(diploid) 24.933
CNS0095596Whole white alabastrum(diploid) 34.301
CNS0095597Whole white alabastrum(diploid) 44.897
CNS0095598Silvery flower (diploied) 14.894
CNS0095599Silvery flower (diploied) 23.410
CNS0095600Silvery flower (diploied) 33.979
CNS0095601Golden flower (diploid) 13.578
CNS0095602Golden flower (diploid) 24.927
CNS0095603Golden flower (diploid) 33.681
CNS0095604Slightly white alabastrum(tetraploid) 15.867
CNS0095605Slightly white alabastrum(tetraploid) 25.602
CNS0095606Slightly white alabastrum(tetraploid) 38.152
CNS0095607Whole white alabastrum(tetraploid) 16.781
CNS0095608Whole white alabastrum(tetraploid) 26.543
CNS0095609Whole white alabastrum(tetraploid) 36.230
CNS0095610Silvery flower (tetraploid) 13.750
CNS0095611Silvery flower (tetraploid) 25.516
CNS0095612Silvery flower (tetraploid) 34.312
CNS0095613Golden flower (tetraploid) 11.866
CNS0095614Golden flower (tetraploid) 23.178
CNS0095615Golden flower (tetraploid) 32.006
CRA001975CRR073297Stem 13.699
CRR073298Stem 23.332
CRR073299Stem 32.255
CRR073300Leaf 15.000
CRR073301Leaf 23.206
CRR073302Leaf 32.504
CRR073303Juvenile bud 12.934
CRR073304Juvenile bud 22.898
CRR073305Juvenile bud 33.158
CRR073306Third green 10.200
CRR073307Third green 20.631
CRR073308Third green 30.905
CRR073309Second white 10.933
CRR073310Second white 20.613
CRR073311Second white 30.981
CRR073312Silver flowering 11.159
CRR073313Silver flowering 21.930
CRR073314Silver flowering 30.596
CRR073315Gold flowering 11.738
CRR073316Gold flowering 21.422
CRR073317Gold flowering 31.447
CRR073318Tawny withering 11.867
CRR073319Tawny withering 21.636
CRR073320Tawny withering 31.352