Detail information of GWHGAAZE028528


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008438277.11.4517E-107PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis melo]
COGYP_005030605.12E-15ATP synthase, F1 sector, epsilon subunit epsilon
Swissprottr|Q40089|ATP4_IPOBA2E-108ATP synthase subunit delta', mitochondrial (Precursor)
trEMBLtr|A0A059C4E2|A0A059C4E2_EUCGR1E-106Uncharacterized protein {ECO:0000313|EMBL:KCW73232.1}
TAIR10AT5G47030.13E-79ATPase, F1 complex, delta/epsilon subunit

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene5909621759099664-
GWHAAZE00000008mRNA5909621759099664-
GWHAAZE00000008exon5909945259099664-
GWHAAZE00000008exon5909621759096561-
GWHAAZE00000008CDS5909945259099664-
GWHAAZE00000008CDS5909621759096561-
Transcript Sequence

Network for GWHGAAZE028528

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02823.17ATP-synt_DE_N551261.50E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02134ATPeF1D, ATP5D, ATP16 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0015986biological_processATP synthesis coupled proton transport
GO:0045261cellular_componentproton-transporting ATP synthase complex, catalytic core F(1)
GO:0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf184.222
SRR3591706second leaf61.228
SRR3591707mature leaf45.861
SRR3591708Shoot apex132.043
SRR3591709Stem147.134
SRR3591710White floral bud128.617
SRR3591711White flower173.890
SRR3591712Green floral bud201.558
SRR3591713Yellow flower158.249
SRP173429 SRR8316895Juvenile bud stage 97.603
SRR8316896Juvenile bud stage 136.519
SRR8316897Juvenile bud stage 130.979
SRR8316894Third green stage 54.016
SRR8316900Third green stage 224.248
SRR8316901Third green stage 221.293
SRR8316898Complete white stage 87.270
SRR8316899Complete white stage 194.826
SRR8316903Complete white stage 126.051
SRR8316902Silver flowering stage104.902
SRR8316904Silver flowering stage110.587
SRR8316905Silver flowering stage70.454
SRR8316906Gold flowering stage 203.874
SRR8316907Gold flowering stage 236.957
SRR8316908Gold flowering stage 418.335
SRP132670SRR6706286Control132.661
SRR6706287Light intensity 50%138.729
SRR6706288Light intensity 20%145.773
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1140.160
CNS0095593Slightly white alabastrum(diploid) 2173.159
CNS0095594Slightly white alabastrum(diploid) 3136.789
CNS0095595Whole white alabastrum(diploid) 2153.321
CNS0095596Whole white alabastrum(diploid) 3181.674
CNS0095597Whole white alabastrum(diploid) 4151.335
CNS0095598Silvery flower (diploied) 190.399
CNS0095599Silvery flower (diploied) 2120.109
CNS0095600Silvery flower (diploied) 3227.289
CNS0095601Golden flower (diploid) 1107.556
CNS0095602Golden flower (diploid) 2188.208
CNS0095603Golden flower (diploid) 3178.010
CNS0095604Slightly white alabastrum(tetraploid) 1232.696
CNS0095605Slightly white alabastrum(tetraploid) 2228.278
CNS0095606Slightly white alabastrum(tetraploid) 3197.502
CNS0095607Whole white alabastrum(tetraploid) 1210.449
CNS0095608Whole white alabastrum(tetraploid) 2240.799
CNS0095609Whole white alabastrum(tetraploid) 3242.201
CNS0095610Silvery flower (tetraploid) 1263.200
CNS0095611Silvery flower (tetraploid) 2313.408
CNS0095612Silvery flower (tetraploid) 3340.710
CNS0095613Golden flower (tetraploid) 1238.934
CNS0095614Golden flower (tetraploid) 2280.076
CNS0095615Golden flower (tetraploid) 3319.582
CRA001975CRR073297Stem 180.237
CRR073298Stem 295.554
CRR073299Stem 3121.143
CRR073300Leaf 1133.714
CRR073301Leaf 2136.429
CRR073302Leaf 3165.745
CRR073303Juvenile bud 1187.204
CRR073304Juvenile bud 2207.722
CRR073305Juvenile bud 3201.804
CRR073306Third green 1184.317
CRR073307Third green 2191.141
CRR073308Third green 3140.514
CRR073309Second white 1329.561
CRR073310Second white 2177.790
CRR073311Second white 3125.500
CRR073312Silver flowering 1163.984
CRR073313Silver flowering 2219.271
CRR073314Silver flowering 3159.052
CRR073315Gold flowering 144.716
CRR073316Gold flowering 244.937
CRR073317Gold flowering 350.488
CRR073318Tawny withering 1110.728
CRR073319Tawny withering 295.289
CRR073320Tawny withering 3101.071