Detail information of GWHGAAZE027981


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrACF05806.17.0306E-155PAE [Litchi chinensis]
trEMBLtr|B3V945|B3V945_LITCN3E-155PAE {ECO:0000313|EMBL:ACF05806.1}
TAIR10AT4G19420.12E-112Pectinacetylesterase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene3323413633237995-
GWHAAZE00000008mRNA3323413633237995-
GWHAAZE00000008exon3323788733237995-
GWHAAZE00000008exon3323765933237741-
GWHAAZE00000008exon3323713033237262-
GWHAAZE00000008exon3323693433237013-
GWHAAZE00000008exon3323673833236824-
GWHAAZE00000008exon3323653533236659-
GWHAAZE00000008exon3323635333236416-
GWHAAZE00000008exon3323609833236151-
GWHAAZE00000008exon3323592933236006-
GWHAAZE00000008exon3323546033235565-
GWHAAZE00000008exon3323464633234794-
GWHAAZE00000008exon3323413633234475-
GWHAAZE00000008CDS3323788733237995-
GWHAAZE00000008CDS3323765933237741-
GWHAAZE00000008CDS3323713033237262-
GWHAAZE00000008CDS3323693433237013-
GWHAAZE00000008CDS3323673833236824-
GWHAAZE00000008CDS3323653533236659-
GWHAAZE00000008CDS3323635333236416-
GWHAAZE00000008CDS3323609833236151-
GWHAAZE00000008CDS3323592933236006-
GWHAAZE00000008CDS3323546033235565-
GWHAAZE00000008CDS3323464633234794-
GWHAAZE00000008CDS3323433533234475-
GWHAAZE00000008three_prime_UTR3323413633234334-
Transcript Sequence

Network for GWHGAAZE027981

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03283.14PAE173711.20E-138
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19882NOTUM Wnt signaling pathway map04310

Gene Ontology

GO term OntologyName
GO:0016787molecular_functionhydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.020
SRR3591706second leaf0.141
SRR3591707mature leaf0.087
SRR3591708Shoot apex0.268
SRR3591709Stem0.098
SRR3591710White floral bud8.135
SRR3591711White flower3.586
SRR3591712Green floral bud5.847
SRR3591713Yellow flower1.224
SRP173429 SRR8316895Juvenile bud stage 7.119
SRR8316896Juvenile bud stage 5.611
SRR8316897Juvenile bud stage 1.299
SRR8316894Third green stage 4.608
SRR8316900Third green stage 8.442
SRR8316901Third green stage 8.864
SRR8316898Complete white stage 0.638
SRR8316899Complete white stage 20.129
SRR8316903Complete white stage 3.738
SRR8316902Silver flowering stage0.473
SRR8316904Silver flowering stage3.264
SRR8316905Silver flowering stage0.361
SRR8316906Gold flowering stage 0.559
SRR8316907Gold flowering stage 0.645
SRR8316908Gold flowering stage 0.302
SRP132670SRR6706286Control6.080
SRR6706287Light intensity 50%8.380
SRR6706288Light intensity 20%7.827
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.153
CNS0095593Slightly white alabastrum(diploid) 26.742
CNS0095594Slightly white alabastrum(diploid) 34.597
CNS0095595Whole white alabastrum(diploid) 24.822
CNS0095596Whole white alabastrum(diploid) 36.928
CNS0095597Whole white alabastrum(diploid) 42.879
CNS0095598Silvery flower (diploied) 13.192
CNS0095599Silvery flower (diploied) 22.434
CNS0095600Silvery flower (diploied) 31.484
CNS0095601Golden flower (diploid) 12.327
CNS0095602Golden flower (diploid) 21.290
CNS0095603Golden flower (diploid) 31.185
CNS0095604Slightly white alabastrum(tetraploid) 14.783
CNS0095605Slightly white alabastrum(tetraploid) 23.816
CNS0095606Slightly white alabastrum(tetraploid) 310.077
CNS0095607Whole white alabastrum(tetraploid) 11.813
CNS0095608Whole white alabastrum(tetraploid) 20.391
CNS0095609Whole white alabastrum(tetraploid) 35.855
CNS0095610Silvery flower (tetraploid) 18.381
CNS0095611Silvery flower (tetraploid) 24.072
CNS0095612Silvery flower (tetraploid) 32.916
CNS0095613Golden flower (tetraploid) 10.163
CNS0095614Golden flower (tetraploid) 219.635
CNS0095615Golden flower (tetraploid) 32.451
CRA001975CRR073297Stem 13.328
CRR073298Stem 22.953
CRR073299Stem 31.810
CRR073300Leaf 13.617
CRR073301Leaf 23.785
CRR073302Leaf 33.182
CRR073303Juvenile bud 15.117
CRR073304Juvenile bud 21.354
CRR073305Juvenile bud 33.116
CRR073306Third green 10.419
CRR073307Third green 20.297
CRR073308Third green 31.356
CRR073309Second white 10.107
CRR073310Second white 20.427
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.116
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.242
CRR073316Gold flowering 20.929
CRR073317Gold flowering 30.422
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.429