Detail information of GWHGAAZE027749


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011081286.10PREDICTED: peroxisomal acyl-coenzyme A oxidase 1-like [Sesamum indicum]
COGYP_290295.18E-80hypothetical protein Tfu_2239
Swissprottr|O65202|ACOX1_ARATH0Peroxisomal acyl-coenzyme A oxidase 1
trEMBLtr|V4VL73|V4VL73_9ROSI0Acyl-coenzyme A oxidase {ECO:0000256|PIRNR:PIRNR000168}
TAIR10AT4G16760.10acyl-CoA oxidase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene2689974226908819-
GWHAAZE00000008mRNA2689974226908819-
GWHAAZE00000008exon2689974226899951-
GWHAAZE00000008exon2690054226900725-
GWHAAZE00000008exon2690152326901592-
GWHAAZE00000008exon2690179626901906-
GWHAAZE00000008exon2690233126902451-
GWHAAZE00000008exon2690287126903002-
GWHAAZE00000008exon2690364726903844-
GWHAAZE00000008exon2690476626904964-
GWHAAZE00000008exon2690593326906095-
GWHAAZE00000008exon2690624926906336-
GWHAAZE00000008exon2690673526906944-
GWHAAZE00000008exon2690713626907197-
GWHAAZE00000008exon2690728126907389-
GWHAAZE00000008exon2690868226908819-
GWHAAZE00000008CDS2690868226908819-
GWHAAZE00000008CDS2690728126907389-
GWHAAZE00000008CDS2690713626907197-
GWHAAZE00000008CDS2690673526906944-
GWHAAZE00000008CDS2690624926906336-
GWHAAZE00000008CDS2690593326906095-
GWHAAZE00000008CDS2690476626904964-
GWHAAZE00000008CDS2690364726903844-
GWHAAZE00000008CDS2690287126903002-
GWHAAZE00000008CDS2690233126902451-
GWHAAZE00000008CDS2690179626901906-
GWHAAZE00000008CDS2690152326901592-
GWHAAZE00000008CDS2690054226900725-
GWHAAZE00000008CDS2689974226899951-
Transcript Sequence

Network for GWHGAAZE027749

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0219map01200 Carbon metabolism
map04146 Peroxisome
map01210 2-Oxocarboxylic acid metabolism
map04146 Peroxisome
GO:0006102 isocitrate metabolic process GOslim:biological_process
GO:0006635 fatty acid beta-oxidation GOslim:biological_process
GO:0051499 D-aminoacyl-tRNA deacylase activity GOslim:molecular_function
GO:0003997 acyl-CoA oxidase activity GOslim:molecular_function
GO:0004450 isocitrate dehydrogenase (NADP+) activity GOslim:molecular_function
GO:0006631 fatty acid metabolic process GOslim:biological_process
map01230 Biosynthesis of amino acids
map01110 Biosynthesis of secondary metabolites
GO:0006520 cellular amino acid metabolic process GOslim:biological_process
map04975 Fat digestion and absorption
map01120 Microbial metabolism in diverse environments
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors GOslim:molecular_function
GO:0008483 transaminase activity GOslim:molecular_function
GO:0009058 biosynthetic process GOslim:biological_process
GO:0055114 oxidation-reduction process GOslim:biological_process
map00720 Carbon fixation pathways in prokaryotes
map00220 Arginine biosynthesis
map00950 Isoquinoline alkaloid biosynthesis
map00960 Tropane, piperidine and pyridine alkaloid biosynthesis
map01040 Biosynthesis of unsaturated fatty acids
map01100 Metabolic pathways
map03320 PPAR signaling pathway
map00360 Phenylalanine metabolism
map00330 Arginine and proline metabolism
map00640 Propanoate metabolism
map00020 Citrate cycle
map00350 Tyrosine metabolism
map00710 Carbon fixation in photosynthetic organisms
map04024 cAMP signaling pathway
map00250 Alanine, aspartate and glutamate metabolism
map00400 Phenylalanine, tyrosine and tryptophan biosynthesis
map00071 Fatty acid degradation
map01212 Fatty acid metabolism
map00410 beta-Alanine metabolism
GO:0051287 NAD binding GOslim:molecular_function
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GOslim:molecular_function
map00592 alpha-Linolenic acid metabolism


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14749.7Acyl-CoA_ox_N171322.80E-30
PF02770.20Acyl-CoA_dh_M1342465.60E-13
PF01756.20ACOX4806562.10E-51
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00232E1.3.3.6, ACOX1, ACOX3 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Carbon metabolismmap01200
Fatty acid metabolismmap01212
Propanoate metabolismmap00640
Fatty acid degradationmap00071
alpha-Linolenic acid metabolismmap00592
Biosynthesis of unsaturated fatty acidsmap01040
beta-Alanine metabolismmap00410
cAMP signaling pathwaymap04024
Peroxisomemap04146
PPAR signaling pathwaymap03320

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0006631biological_processfatty acid metabolic process
GO:0006635biological_processfatty acid beta-oxidation
GO:0005777cellular_componentperoxisome
GO:0016627molecular_functionoxidoreductase activity, acting on the CH-CH group of donors
GO:0003997molecular_functionacyl-CoA oxidase activity
GO:0071949molecular_functionFAD binding
GO:0050660molecular_functionflavin adenine dinucleotide binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf144.448
SRR3591706second leaf70.075
SRR3591707mature leaf69.716
SRR3591708Shoot apex101.578
SRR3591709Stem95.570
SRR3591710White floral bud227.281
SRR3591711White flower246.590
SRR3591712Green floral bud166.087
SRR3591713Yellow flower300.923
SRP173429 SRR8316895Juvenile bud stage 119.256
SRR8316896Juvenile bud stage 159.670
SRR8316897Juvenile bud stage 83.020
SRR8316894Third green stage 64.930
SRR8316900Third green stage 224.318
SRR8316901Third green stage 200.104
SRR8316898Complete white stage 132.415
SRR8316899Complete white stage 251.047
SRR8316903Complete white stage 220.104
SRR8316902Silver flowering stage174.731
SRR8316904Silver flowering stage228.166
SRR8316905Silver flowering stage117.149
SRR8316906Gold flowering stage 564.159
SRR8316907Gold flowering stage 497.813
SRR8316908Gold flowering stage 385.037
SRP132670SRR6706286Control271.097
SRR6706287Light intensity 50%279.303
SRR6706288Light intensity 20%299.696
CNP0000432CNS0095592Slightly white alabastrum(diploid) 189.258
CNS0095593Slightly white alabastrum(diploid) 295.458
CNS0095594Slightly white alabastrum(diploid) 3113.199
CNS0095595Whole white alabastrum(diploid) 296.977
CNS0095596Whole white alabastrum(diploid) 378.758
CNS0095597Whole white alabastrum(diploid) 492.554
CNS0095598Silvery flower (diploied) 1149.950
CNS0095599Silvery flower (diploied) 2181.605
CNS0095600Silvery flower (diploied) 3428.862
CNS0095601Golden flower (diploid) 1187.359
CNS0095602Golden flower (diploid) 2463.293
CNS0095603Golden flower (diploid) 3450.837
CNS0095604Slightly white alabastrum(tetraploid) 1107.998
CNS0095605Slightly white alabastrum(tetraploid) 290.558
CNS0095606Slightly white alabastrum(tetraploid) 3217.996
CNS0095607Whole white alabastrum(tetraploid) 170.904
CNS0095608Whole white alabastrum(tetraploid) 268.480
CNS0095609Whole white alabastrum(tetraploid) 3214.473
CNS0095610Silvery flower (tetraploid) 1459.880
CNS0095611Silvery flower (tetraploid) 2436.370
CNS0095612Silvery flower (tetraploid) 3450.749
CNS0095613Golden flower (tetraploid) 1331.432
CNS0095614Golden flower (tetraploid) 2409.425
CNS0095615Golden flower (tetraploid) 3359.761
CRA001975CRR073297Stem 1172.806
CRR073298Stem 2164.704
CRR073299Stem 3152.812
CRR073300Leaf 1228.809
CRR073301Leaf 2208.057
CRR073302Leaf 3207.808
CRR073303Juvenile bud 1235.166
CRR073304Juvenile bud 2229.999
CRR073305Juvenile bud 3274.335
CRR073306Third green 1250.208
CRR073307Third green 2144.048
CRR073308Third green 3203.699
CRR073309Second white 1443.885
CRR073310Second white 2381.463
CRR073311Second white 3426.732
CRR073312Silver flowering 1474.251
CRR073313Silver flowering 2505.811
CRR073314Silver flowering 3479.473
CRR073315Gold flowering 171.494
CRR073316Gold flowering 2100.616
CRR073317Gold flowering 384.004
CRR073318Tawny withering 189.069
CRR073319Tawny withering 2121.623
CRR073320Tawny withering 372.612