Detail information of GWHGAAZE027676


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002520551.13.51436E-56eukaryotic translation initiation factor 2c, putative [Ricinus communis]
Swissprottr|Q9SHF3|AGO2_ARATH2E-44Protein argonaute 2
trEMBLtr|B9S3I2|B9S3I2_RICCO1E-56Eukaryotic translation initiation factor 2c, putative {ECO:0000313|EMBL:EEF41837.1}
TAIR10AT1G31280.11E-39Argonaute family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene2545974225460308+
GWHAAZE00000008mRNA2545974225460308+
GWHAAZE00000008exon2545974225460308+
GWHAAZE00000008CDS2545974225460308+
Transcript Sequence

Network for GWHGAAZE027676

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16486.6ArgoN411723.00E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K11593ELF2C, AGO Axon regeneration map04361

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.489
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.655
SRR3591709Stem0.291
SRR3591710White floral bud0.965
SRR3591711White flower0.000
SRR3591712Green floral bud0.193
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 1.442
SRR8316896Juvenile bud stage 1.955
SRR8316897Juvenile bud stage 0.762
SRR8316894Third green stage 0.775
SRR8316900Third green stage 1.168
SRR8316901Third green stage 3.225
SRR8316898Complete white stage 0.446
SRR8316899Complete white stage 1.373
SRR8316903Complete white stage 0.500
SRR8316902Silver flowering stage0.355
SRR8316904Silver flowering stage0.595
SRR8316905Silver flowering stage0.150
SRR8316906Gold flowering stage 0.383
SRR8316907Gold flowering stage 0.060
SRR8316908Gold flowering stage 0.664
SRP132670SRR6706286Control1.117
SRR6706287Light intensity 50%0.928
SRR6706288Light intensity 20%1.216
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.398
CNS0095593Slightly white alabastrum(diploid) 20.544
CNS0095594Slightly white alabastrum(diploid) 30.523
CNS0095595Whole white alabastrum(diploid) 20.221
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.172
CNS0095598Silvery flower (diploied) 10.984
CNS0095599Silvery flower (diploied) 20.351
CNS0095600Silvery flower (diploied) 32.900
CNS0095601Golden flower (diploid) 11.555
CNS0095602Golden flower (diploid) 21.658
CNS0095603Golden flower (diploid) 30.594
CNS0095604Slightly white alabastrum(tetraploid) 11.573
CNS0095605Slightly white alabastrum(tetraploid) 21.232
CNS0095606Slightly white alabastrum(tetraploid) 33.233
CNS0095607Whole white alabastrum(tetraploid) 10.250
CNS0095608Whole white alabastrum(tetraploid) 20.093
CNS0095609Whole white alabastrum(tetraploid) 32.019
CNS0095610Silvery flower (tetraploid) 11.651
CNS0095611Silvery flower (tetraploid) 21.585
CNS0095612Silvery flower (tetraploid) 30.786
CNS0095613Golden flower (tetraploid) 11.326
CNS0095614Golden flower (tetraploid) 22.394
CNS0095615Golden flower (tetraploid) 30.954
CRA001975CRR073297Stem 10.832
CRR073298Stem 21.587
CRR073299Stem 30.341
CRR073300Leaf 11.521
CRR073301Leaf 20.697
CRR073302Leaf 30.148
CRR073303Juvenile bud 10.352
CRR073304Juvenile bud 20.110
CRR073305Juvenile bud 30.141
CRR073306Third green 10.000
CRR073307Third green 20.117
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.014
CRR073311Second white 30.183
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.168
CRR073316Gold flowering 21.177
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.730
CRR073320Tawny withering 30.000