Gene detail

Detail information of GWHGAAZE027621

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010546005.1	0	PREDICTED: lysophospholipid acyltransferase 1 [Tarenaya hassleriana]
Swissprot	tr\|Q9CAN8\|MBOA2_ARATH	3E-180	Lysophospholipid acyltransferase 2
trEMBL	tr\|A0A072UQR7\|A0A072UQR7_MEDTR	0	Membrane-bound O-acyltransferase family MBOAT protein {ECO:0000313\|EMBL:KEH31706.1}
TAIR10	AT1G12640.1	1E-145	MBOAT (membrane bound O-acyl transferase) family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	23841454	23856020	+
GWHAAZE00000008	mRNA	23841454	23856020	+
GWHAAZE00000008	exon	23841454	23841758	+
GWHAAZE00000008	exon	23851017	23851072	+
GWHAAZE00000008	exon	23851675	23851685	+
GWHAAZE00000008	exon	23852357	23852765	+
GWHAAZE00000008	exon	23853909	23853994	+
GWHAAZE00000008	exon	23854674	23854737	+
GWHAAZE00000008	exon	23854888	23855006	+
GWHAAZE00000008	exon	23855799	23856020	+
GWHAAZE00000008	CDS	23841454	23841758	+
GWHAAZE00000008	CDS	23851017	23851072	+
GWHAAZE00000008	CDS	23851675	23851685	+
GWHAAZE00000008	CDS	23852357	23852765	+
GWHAAZE00000008	CDS	23853909	23853994	+
GWHAAZE00000008	CDS	23854674	23854737	+
GWHAAZE00000008	CDS	23854888	23855006	+
GWHAAZE00000008	CDS	23855799	23855939	+
GWHAAZE00000008	three_prime_UTR	23855940	23856020	+

Transcript Sequence
>GWHTAAZE027655 ATGGAGCTTGACATGGACGCAATGGCGTCGGCGATAGGCATCTCCGTGCCGGTCCTCCGATTCCTTCTCTGCTTCCTCGCCACAATTCCGGTCAGCTTCTTCCACCGGTTCATTCCAGGAGGTCCGCCAGCCAAGCACTTCTACGCCGCCGCTACAGGTGCTATTCTCTCGTATCTCTCGTTCGGATTTTCGTCTAATCTCCACTTTTTGGTGCCTATGTTGATCAGCTATGCATCCATGGTGCTTTACCGGAGGAGATGCGGTCTCATCTCGTTTGTATTGGCGCTAGGATATCTCATCGGATGCCATGTCTACTACATGAGTGGAGATGCATGGAAGGAGGGAGGTATTGATGCTACTGGAGCCTTGATGATTTGGATGAAGTCAGAGAAGGGAAAATCGCCGTCACCTTATGGGGCAACAATTAGAGCTCTTCTTCAAGCTGCTTTCTGTATGGGCTTGTATATGTATTTGGTACCCCTTTTCCCACTTAATCGGTTCACCGATCCCGTGTACCAGGAATGGGGATTCTTCAAAAAGTTAGGTTACCAATACATGGCCGGCTTTTCAGCTCGTTGGAAATATTATTTCATATGGTCAATATCAGAAGCTTCTATCATTATATCTGGGTTGGGTTTTAGTGGGTGGACAAATTCTTCTCCACCAAAACCCACATGGGACCGTGCAAAAAATGTCGACATATTGGGTGTTGAGTTGGCGAAGAGTGCAGTTCAGATACCGCTTGTGTGGAACATACAAGTCAGCACTTGGCTCCGGCACTATGTTTATGATAGGCTCATTCAGAAGGGAAAGAGGCCTGGTTTCCTACAATTGCTGGCTACACAGACTGTCAGTGCTGTTTGGCATGGATTATATCCTGGGTACATCATCTTCTTTATTCAGTCTGCTTTGATGATTGCCGGTTCACGAGTCATTTACAGATGGCAGCAAGCTATTCCTCCATCTTTGTCTCTCGTTAAGACGATGTTGGTGTTTATGAACTTCGCCTACACGCTTCTGGTTTTGAACTATTCGTCTGTTGGCTTCATGGTATTGAGCTTGCATGAAACACTTACTGCTTATGGTAGCGTATATTATATCGGAACCATTCTCCCGATAGCAGTGATCTTCCTCGGTTCTGTAATTAAACCGGCAAAGCCTGCCAGATCGAAAGCTCGAAAAGAACAGTGAGGTAGGAAATTAATTTGTGGATTCTTTGTCAAGCATTTGCCAAAAATGGTATGCGTTGTTTCTTGGCAAAGTTGTAACATT

Network for GWHGAAZE027621

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03062.20	MBOAT	131	333	3.00E-43

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K13519	LPT1, ALE1	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Glycerolipid metabolism	map00561
		Glycerophospholipid metabolism	map00564
		Ether lipid metabolism	map00565

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	75.271
	SRR3591706	second leaf	81.731
	SRR3591707	mature leaf	46.211
	SRR3591708	Shoot apex	67.338
	SRR3591709	Stem	55.584
	SRR3591710	White floral bud	78.208
	SRR3591711	White flower	57.028
	SRR3591712	Green floral bud	64.326
	SRR3591713	Yellow flower	56.366
SRP173429	SRR8316895	Juvenile bud stage	29.016
	SRR8316896	Juvenile bud stage	54.755
	SRR8316897	Juvenile bud stage	21.184
	SRR8316894	Third green stage	17.914
	SRR8316900	Third green stage	52.321
	SRR8316901	Third green stage	48.391
	SRR8316898	Complete white stage	37.822
	SRR8316899	Complete white stage	66.643
	SRR8316903	Complete white stage	53.689
	SRR8316902	Silver flowering stage	45.527
	SRR8316904	Silver flowering stage	64.001
	SRR8316905	Silver flowering stage	39.042
	SRR8316906	Gold flowering stage	117.079
	SRR8316907	Gold flowering stage	138.691
	SRR8316908	Gold flowering stage	126.080
SRP132670	SRR6706286	Control	34.922
	SRR6706287	Light intensity 50%	36.406
	SRR6706288	Light intensity 20%	41.870
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	40.195
	CNS0095593	Slightly white alabastrum(diploid) 2	42.432
	CNS0095594	Slightly white alabastrum(diploid) 3	45.466
	CNS0095595	Whole white alabastrum(diploid) 2	31.703
	CNS0095596	Whole white alabastrum(diploid) 3	37.333
	CNS0095597	Whole white alabastrum(diploid) 4	30.593
	CNS0095598	Silvery flower (diploied) 1	27.688
	CNS0095599	Silvery flower (diploied) 2	32.947
	CNS0095600	Silvery flower (diploied) 3	74.161
	CNS0095601	Golden flower (diploid) 1	28.202
	CNS0095602	Golden flower (diploid) 2	59.155
	CNS0095603	Golden flower (diploid) 3	56.296
	CNS0095604	Slightly white alabastrum(tetraploid) 1	52.289
	CNS0095605	Slightly white alabastrum(tetraploid) 2	46.719
	CNS0095606	Slightly white alabastrum(tetraploid) 3	59.981
	CNS0095607	Whole white alabastrum(tetraploid) 1	24.600
	CNS0095608	Whole white alabastrum(tetraploid) 2	23.961
	CNS0095609	Whole white alabastrum(tetraploid) 3	48.727
	CNS0095610	Silvery flower (tetraploid) 1	65.525
	CNS0095611	Silvery flower (tetraploid) 2	69.900
	CNS0095612	Silvery flower (tetraploid) 3	159.417
	CNS0095613	Golden flower (tetraploid) 1	54.790
	CNS0095614	Golden flower (tetraploid) 2	62.039
	CNS0095615	Golden flower (tetraploid) 3	94.804
CRA001975	CRR073297	Stem 1	46.222
	CRR073298	Stem 2	40.598
	CRR073299	Stem 3	54.759
	CRR073300	Leaf 1	53.438
	CRR073301	Leaf 2	49.872
	CRR073302	Leaf 3	62.039
	CRR073303	Juvenile bud 1	63.655
	CRR073304	Juvenile bud 2	66.813
	CRR073305	Juvenile bud 3	64.230
	CRR073306	Third green 1	203.121
	CRR073307	Third green 2	228.452
	CRR073308	Third green 3	187.916
	CRR073309	Second white 1	311.697
	CRR073310	Second white 2	196.380
	CRR073311	Second white 3	253.818
	CRR073312	Silver flowering 1	214.687
	CRR073313	Silver flowering 2	177.191
	CRR073314	Silver flowering 3	152.063
	CRR073315	Gold flowering 1	41.093
	CRR073316	Gold flowering 2	44.602
	CRR073317	Gold flowering 3	47.056
	CRR073318	Tawny withering 1	56.094
	CRR073319	Tawny withering 2	46.245
	CRR073320	Tawny withering 3	58.093